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4HAU
Asym. Unit
Info
Asym.Unit (495 KB)
Biol.Unit 1 (488 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CRM1 INHIBITOR RATJADONE A IN COMPLEX WITH CRM1-RAN-RANBP1
Authors
:
Q. Sun, Y. M. Chook
Date
:
27 Sep 12 (Deposition) - 09 Jan 13 (Release) - 06 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Heat Repeat, Nuclear Export, Ran-Ranbp1, Ratjadone A, Protein Transport-Antibiotic Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Q. Sun, Y. P. Carrasco, Y. Hu, X. Guo, H. Mirzaei, J. Macmillan, Y. M. Chook
Nuclear Export Inhibition Through Covalent Conjugation And Hydrolysis Of Leptomycin B By Crm1.
Proc. Natl. Acad. Sci. Usa V. 110 1303 2013
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Hetero Components
(6, 13)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
3a: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
5a: MAGNESIUM ION (MGa)
6a: RATJADONE A, BOUND FORM (RJAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
2
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
3
GNP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
4
GOL
3
Ligand/Ion
GLYCEROL
5
MG
1
Ligand/Ion
MAGNESIUM ION
6
RJA
1
Ligand/Ion
RATJADONE A, BOUND FORM
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:18 , GLY A:19 , GLY A:20 , THR A:21 , GLY A:22 , LYS A:23 , THR A:24 , THR A:25 , PHE A:35 , GLU A:36 , LYS A:37 , LYS A:38 , TYR A:39 , THR A:42 , GLY A:68 , GLN A:69 , ASN A:122 , LYS A:123 , ASP A:125 , ILE A:126 , SER A:150 , ALA A:151 , LYS A:152 , MG A:302 , HOH A:419 , HOH A:422 , HOH A:567 , HOH A:583 , HOH A:584
BINDING SITE FOR RESIDUE GNP A 301
02
AC2
SOFTWARE
THR A:24 , THR A:42 , GNP A:301 , HOH A:583 , HOH A:584
BINDING SITE FOR RESIDUE MG A 302
03
AC3
SOFTWARE
GLN A:196 , TYR A:197 , HOH C:2033
BINDING SITE FOR RESIDUE EDO A 303
04
AC4
SOFTWARE
ASN A:103 , ASP A:107 , HOH A:463
BINDING SITE FOR RESIDUE EDO A 304
05
AC5
SOFTWARE
ILE C:532 , LYS C:533 , LEU C:536 , CYS C:539 , ALA C:552 , ILE C:555 , HIS C:569 , PHE C:572 , THR C:575 , LYS C:579 , PHE C:583 , HOH C:1867 , HOH C:2191 , HOH C:2195
BINDING SITE FOR RESIDUE RJA C 1101
06
AC6
SOFTWARE
GLU C:191 , ARG C:227 , GLU C:231
BINDING SITE FOR RESIDUE GOL C 1102
07
AC7
SOFTWARE
HIS A:105 , VAL A:109 , ARG A:110 , LYS A:142 , GLU C:164 , ARG C:219 , HOH C:1405 , HOH C:1854 , HOH C:2224
BINDING SITE FOR RESIDUE GOL C 1103
08
AC8
SOFTWARE
LEU C:842 , ASN C:846 , TRP C:891 , HOH C:1536 , HOH C:2114
BINDING SITE FOR RESIDUE GOL C 1104
09
AC9
SOFTWARE
ARG C:327 , ALA C:328 , GLU C:331 , ASP C:372 , LYS C:416 , HOH C:1897
BINDING SITE FOR RESIDUE EDO C 1105
10
BC1
SOFTWARE
TYR C:967 , GLN C:988 , SER C:992 , THR C:1019
BINDING SITE FOR RESIDUE EDO C 1106
11
BC2
SOFTWARE
THR C:1007 , SER C:1008 , GLU C:1009 , HOH C:1900 , HOH C:2207
BINDING SITE FOR RESIDUE CL C 1107
12
BC3
SOFTWARE
LYS C:605 , CYS C:606 , LYS C:607 , TYR C:608
BINDING SITE FOR RESIDUE CL C 1108
13
BC4
SOFTWARE
PRO C:61 , GLN C:62
BINDING SITE FOR RESIDUE CL C 1109
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d4haub_ (B:)
2a: SCOP_d4haua_ (A:)
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Classes
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Protein Domains
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(
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Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
automated matches
(50)
Protein domain
:
automated matches
(50)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(14)
1a
d4haub_
B:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Ran
(37)
Human (Homo sapiens) [TaxId: 9606]
(29)
2a
d4haua_
A:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
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Chain C
Asymmetric Unit 1
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Asym.Unit (495 KB)
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