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4H19
Biol. Unit 2
Info
Asym.Unit (1.0 MB)
Biol.Unit 1 (539 KB)
Biol.Unit 2 (531 KB)
Biol.Unit 3 (536 KB)
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Title
:
CRYSTAL STRUCTURE OF AN ENOLASE (MANDELATE RACEMASE SUBGROUP, TARGET EFI-502087) FROM AGROBACTERIUM TUMEFACIENS, WITH BOUND MG AND D-RIBONOHYDROXAMATE, ORDERED LOOP
Authors
:
M. W. Vetting, J. T. Bouvier, L. L. Morisco, S. R. Wasserman, S. Sojitra, H. J. Imker, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Ef
Date
:
10 Sep 12 (Deposition) - 31 Oct 12 (Release) - 31 Oct 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,D,F,K (2x)
Biol. Unit 2: B,C,E,G,H,I,L,M (1x)
Biol. Unit 3: J,N,O,P (2x)
Keywords
:
Enolase, Mandelate Racemase Subgroup, Enzyme Function Initiative, Efi, Structural Genomics, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. W. Vetting, J. T. Bouvier, L. L. Morisco, S. R. Wasserman, S. Sojitra H. J. Imker, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of An Enolase (Mandelate Racemase Subgroup, Target Efi-502087) From Agrobacterium Tumefaciens With Bound Mg And D-Ribonohydroxamate, Ordered Loop
To Be Published
[
close entry info
]
Hetero Components
(2, 27)
Info
All Hetero Components
1a: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRa)
1b: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRb)
1c: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRc)
1d: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRd)
1e: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRe)
1f: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRf)
1g: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRg)
1h: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRh)
1i: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRi)
1j: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRj)
1k: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRk)
1l: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRl)
1m: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRm)
1n: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRn)
1o: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRo)
1p: (2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXID... (0YRp)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
3a: CHLORIDE ION (CLa)
3aa: CHLORIDE ION (CLaa)
3ab: CHLORIDE ION (CLab)
3ac: CHLORIDE ION (CLac)
3ad: CHLORIDE ION (CLad)
3ae: CHLORIDE ION (CLae)
3af: CHLORIDE ION (CLaf)
3ag: CHLORIDE ION (CLag)
3ah: CHLORIDE ION (CLah)
3ai: CHLORIDE ION (CLai)
3aj: CHLORIDE ION (CLaj)
3ak: CHLORIDE ION (CLak)
3al: CHLORIDE ION (CLal)
3am: CHLORIDE ION (CLam)
3an: CHLORIDE ION (CLan)
3ao: CHLORIDE ION (CLao)
3ap: CHLORIDE ION (CLap)
3aq: CHLORIDE ION (CLaq)
3ar: CHLORIDE ION (CLar)
3as: CHLORIDE ION (CLas)
3at: CHLORIDE ION (CLat)
3au: CHLORIDE ION (CLau)
3av: CHLORIDE ION (CLav)
3aw: CHLORIDE ION (CLaw)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
3d: CHLORIDE ION (CLd)
3e: CHLORIDE ION (CLe)
3f: CHLORIDE ION (CLf)
3g: CHLORIDE ION (CLg)
3h: CHLORIDE ION (CLh)
3i: CHLORIDE ION (CLi)
3j: CHLORIDE ION (CLj)
3k: CHLORIDE ION (CLk)
3l: CHLORIDE ION (CLl)
3m: CHLORIDE ION (CLm)
3n: CHLORIDE ION (CLn)
3o: CHLORIDE ION (CLo)
3p: CHLORIDE ION (CLp)
3q: CHLORIDE ION (CLq)
3r: CHLORIDE ION (CLr)
3s: CHLORIDE ION (CLs)
3t: CHLORIDE ION (CLt)
3u: CHLORIDE ION (CLu)
3v: CHLORIDE ION (CLv)
3w: CHLORIDE ION (CLw)
3x: CHLORIDE ION (CLx)
3y: CHLORIDE ION (CLy)
3z: CHLORIDE ION (CLz)
4a: GLYCEROL (GOLa)
4aa: GLYCEROL (GOLaa)
4ab: GLYCEROL (GOLab)
4ac: GLYCEROL (GOLac)
4ad: GLYCEROL (GOLad)
4ae: GLYCEROL (GOLae)
4af: GLYCEROL (GOLaf)
4ag: GLYCEROL (GOLag)
4ah: GLYCEROL (GOLah)
4ai: GLYCEROL (GOLai)
4aj: GLYCEROL (GOLaj)
4ak: GLYCEROL (GOLak)
4al: GLYCEROL (GOLal)
4am: GLYCEROL (GOLam)
4an: GLYCEROL (GOLan)
4ao: GLYCEROL (GOLao)
4ap: GLYCEROL (GOLap)
4aq: GLYCEROL (GOLaq)
4ar: GLYCEROL (GOLar)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
4i: GLYCEROL (GOLi)
4j: GLYCEROL (GOLj)
4k: GLYCEROL (GOLk)
4l: GLYCEROL (GOLl)
4m: GLYCEROL (GOLm)
4n: GLYCEROL (GOLn)
4o: GLYCEROL (GOLo)
4p: GLYCEROL (GOLp)
4q: GLYCEROL (GOLq)
4r: GLYCEROL (GOLr)
4s: GLYCEROL (GOLs)
4t: GLYCEROL (GOLt)
4u: GLYCEROL (GOLu)
4v: GLYCEROL (GOLv)
4w: GLYCEROL (GOLw)
4x: GLYCEROL (GOLx)
4y: GLYCEROL (GOLy)
4z: GLYCEROL (GOLz)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
5e: MAGNESIUM ION (MGe)
5f: MAGNESIUM ION (MGf)
5g: MAGNESIUM ION (MGg)
5h: MAGNESIUM ION (MGh)
5i: MAGNESIUM ION (MGi)
5j: MAGNESIUM ION (MGj)
5k: MAGNESIUM ION (MGk)
5l: MAGNESIUM ION (MGl)
5m: MAGNESIUM ION (MGm)
5n: MAGNESIUM ION (MGn)
5o: MAGNESIUM ION (MGo)
5p: MAGNESIUM ION (MGp)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
0YR
8
Ligand/Ion
(2R,3R,4R)-N,2,3,4,5-PENTAKIS(OXIDANYL)PENTANAMIDE
2
CA
-1
Ligand/Ion
CALCIUM ION
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
GOL
19
Ligand/Ion
GLYCEROL
5
MG
-1
Ligand/Ion
MAGNESIUM ION
[
close Hetero Component info
]
Sites
(63, 63)
Info
All Sites
01: BC2 (SOFTWARE)
02: BC3 (SOFTWARE)
03: BC4 (SOFTWARE)
04: BC5 (SOFTWARE)
05: BC6 (SOFTWARE)
06: BC7 (SOFTWARE)
07: BC8 (SOFTWARE)
08: BC9 (SOFTWARE)
09: CC1 (SOFTWARE)
10: CC2 (SOFTWARE)
11: CC3 (SOFTWARE)
12: CC4 (SOFTWARE)
13: CC5 (SOFTWARE)
14: CC6 (SOFTWARE)
15: CC7 (SOFTWARE)
16: CC8 (SOFTWARE)
17: CC9 (SOFTWARE)
18: EC3 (SOFTWARE)
19: EC4 (SOFTWARE)
20: EC5 (SOFTWARE)
21: EC6 (SOFTWARE)
22: EC7 (SOFTWARE)
23: EC8 (SOFTWARE)
24: EC9 (SOFTWARE)
25: FC1 (SOFTWARE)
26: GC1 (SOFTWARE)
27: GC2 (SOFTWARE)
28: GC3 (SOFTWARE)
29: GC4 (SOFTWARE)
30: GC5 (SOFTWARE)
31: GC6 (SOFTWARE)
32: GC7 (SOFTWARE)
33: GC8 (SOFTWARE)
34: GC9 (SOFTWARE)
35: HC1 (SOFTWARE)
36: HC2 (SOFTWARE)
37: HC3 (SOFTWARE)
38: HC4 (SOFTWARE)
39: HC5 (SOFTWARE)
40: HC6 (SOFTWARE)
41: HC7 (SOFTWARE)
42: HC8 (SOFTWARE)
43: HC9 (SOFTWARE)
44: IC1 (SOFTWARE)
45: IC2 (SOFTWARE)
46: IC3 (SOFTWARE)
47: IC4 (SOFTWARE)
48: IC5 (SOFTWARE)
49: IC6 (SOFTWARE)
50: JC7 (SOFTWARE)
51: JC8 (SOFTWARE)
52: JC9 (SOFTWARE)
53: KC1 (SOFTWARE)
54: KC2 (SOFTWARE)
55: KC3 (SOFTWARE)
56: KC4 (SOFTWARE)
57: KC5 (SOFTWARE)
58: KC6 (SOFTWARE)
59: KC7 (SOFTWARE)
60: KC8 (SOFTWARE)
61: KC9 (SOFTWARE)
62: LC1 (SOFTWARE)
63: LC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
BC2
SOFTWARE
ASP B:268 , HIS B:298 , ASP C:268 , HIS C:298
BINDING SITE FOR RESIDUE CA B 401
02
BC3
SOFTWARE
TYR B:226 , TYR B:274 , THR B:324
BINDING SITE FOR RESIDUE CL B 402
03
BC4
SOFTWARE
VAL B:97 , ALA B:100 , GLY B:101 , ILE B:102 , THR B:103 , GLY G:101 , ILE G:102
BINDING SITE FOR RESIDUE CL B 403
04
BC5
SOFTWARE
MET B:309 , ILE B:329 , PRO B:330 , TRP B:331 , ILE B:332 , LYS B:333 , HOH B:503
BINDING SITE FOR RESIDUE CL B 404
05
BC6
SOFTWARE
ASP B:203 , GLU B:229 , GLU B:255 , 0YR B:409 , HOH B:517
BINDING SITE FOR RESIDUE MG B 405
06
BC7
SOFTWARE
PRO B:180 , ASN B:181 , ARG B:215 , ALA B:219 , HOH B:598 , ASP E:224
BINDING SITE FOR RESIDUE GOL B 406
07
BC8
SOFTWARE
ARG B:90 , HOH B:559 , HOH B:710 , ARG C:299 , TRP G:233
BINDING SITE FOR RESIDUE GOL B 407
08
BC9
SOFTWARE
HIS B:54 , HOH B:818 , CYS G:68 , PRO G:71 , TYR G:91
BINDING SITE FOR RESIDUE GOL B 408
09
CC1
SOFTWARE
ASP B:22 , HIS B:25 , TRP B:30 , HIS B:52 , TRP B:147 , LYS B:172 , LYS B:174 , ASP B:203 , ASN B:205 , GLU B:229 , GLU B:255 , HIS B:305 , GLU B:327 , MG B:405 , HOH B:517 , HOH B:536 , TRP G:96
BINDING SITE FOR RESIDUE 0YR B 409
10
CC2
SOFTWARE
TYR C:226 , TYR C:274 , THR C:324 , HOH C:658
BINDING SITE FOR RESIDUE CL C 401
11
CC3
SOFTWARE
MET C:309 , ILE C:329 , PRO C:330 , TRP C:331 , ILE C:332 , LYS C:333 , HOH C:505
BINDING SITE FOR RESIDUE CL C 402
12
CC4
SOFTWARE
VAL C:97 , ALA C:100 , GLY C:101 , ILE C:102 , THR C:103 , GLY M:101 , ILE M:102
BINDING SITE FOR RESIDUE CL C 403
13
CC5
SOFTWARE
ASP C:203 , GLU C:229 , GLU C:255 , 0YR C:408 , HOH C:514
BINDING SITE FOR RESIDUE MG C 404
14
CC6
SOFTWARE
PRO C:180 , ASN C:181 , ARG C:215 , PHE C:216 , ALA C:219 , HOH C:622 , ASP L:224
BINDING SITE FOR RESIDUE GOL C 405
15
CC7
SOFTWARE
ARG B:299 , ARG C:90 , HOH C:568 , TRP M:233
BINDING SITE FOR RESIDUE GOL C 406
16
CC8
SOFTWARE
ARG C:134 , GLY C:137 , VAL C:138 , GLU C:139 , THR C:324 , HOH C:658
BINDING SITE FOR RESIDUE GOL C 407
17
CC9
SOFTWARE
ASP C:22 , HIS C:25 , TRP C:30 , HIS C:52 , TRP C:147 , LYS C:172 , LYS C:174 , ASP C:203 , ASN C:205 , GLU C:229 , GLU C:255 , HIS C:305 , GLU C:327 , MG C:404 , HOH C:715 , TRP M:96
BINDING SITE FOR RESIDUE 0YR C 408
18
EC3
SOFTWARE
TYR E:226 , TYR E:274 , THR E:324 , HOH E:644
BINDING SITE FOR RESIDUE CL E 401
19
EC4
SOFTWARE
VAL E:97 , ALA E:100 , ILE E:102 , THR E:103 , GLY H:101 , ILE H:102
BINDING SITE FOR RESIDUE CL E 402
20
EC5
SOFTWARE
MET E:309 , ILE E:329 , PRO E:330 , TRP E:331 , ILE E:332 , LYS E:333 , HOH E:503
BINDING SITE FOR RESIDUE CL E 403
21
EC6
SOFTWARE
ASP E:203 , GLU E:229 , GLU E:255 , 0YR E:408 , HOH E:705
BINDING SITE FOR RESIDUE MG E 404
22
EC7
SOFTWARE
PRO E:180 , ASN E:181 , ARG E:215 , ALA E:219 , HOH E:565 , ASP I:224
BINDING SITE FOR RESIDUE GOL E 405
23
EC8
SOFTWARE
ARG E:134 , GLY E:137 , VAL E:138 , GLU E:139 , THR E:324 , ILE E:325 , HOH E:644 , HOH E:842
BINDING SITE FOR RESIDUE GOL E 406
24
EC9
SOFTWARE
ARG E:90 , HOH E:534 , HOH E:685 , ARG G:299 , TRP H:233
BINDING SITE FOR RESIDUE GOL E 407
25
FC1
SOFTWARE
ASP E:22 , HIS E:25 , TRP E:30 , HIS E:52 , TRP E:147 , LYS E:172 , LYS E:174 , ASP E:203 , ASN E:205 , GLU E:229 , GLU E:255 , HIS E:305 , GLU E:327 , MG E:404 , HOH E:705 , HOH E:860 , TRP H:96
BINDING SITE FOR RESIDUE 0YR E 408
26
GC1
SOFTWARE
ASP E:268 , HIS E:298 , ASP G:268 , HIS G:298
BINDING SITE FOR RESIDUE CA G 401
27
GC2
SOFTWARE
TYR G:226 , TYR G:274 , THR G:324 , HOH G:692
BINDING SITE FOR RESIDUE CL G 402
28
GC3
SOFTWARE
GLY B:101 , ILE B:102 , VAL G:97 , ALA G:100 , ILE G:102 , THR G:103
BINDING SITE FOR RESIDUE CL G 403
29
GC4
SOFTWARE
MET G:309 , ILE G:329 , PRO G:330 , TRP G:331 , ILE G:332 , LYS G:333 , HOH G:502
BINDING SITE FOR RESIDUE CL G 404
30
GC5
SOFTWARE
ASP G:203 , GLU G:229 , GLU G:255 , 0YR G:409 , HOH G:524
BINDING SITE FOR RESIDUE MG G 405
31
GC6
SOFTWARE
ASP C:224 , PRO G:180 , ASN G:181 , ARG G:215 , ALA G:219 , HOH G:574
BINDING SITE FOR RESIDUE GOL G 406
32
GC7
SOFTWARE
ARG G:134 , THR G:135 , GLY G:137 , VAL G:138 , GLU G:139 , THR G:324
BINDING SITE FOR RESIDUE GOL G 407
33
GC8
SOFTWARE
TRP B:233 , ARG E:299 , HOH E:597 , ARG G:90 , HOH G:725
BINDING SITE FOR RESIDUE GOL G 408
34
GC9
SOFTWARE
TRP B:96 , ASP G:22 , HIS G:25 , TRP G:30 , HIS G:52 , TRP G:147 , LYS G:172 , LYS G:174 , ASP G:203 , ASN G:205 , GLU G:229 , GLU G:255 , HIS G:305 , GLU G:327 , MG G:405 , HOH G:524 , HOH G:841
BINDING SITE FOR RESIDUE 0YR G 409
35
HC1
SOFTWARE
ASP H:268 , HIS H:298 , ASP I:268 , HIS I:298
BINDING SITE FOR RESIDUE CA H 401
36
HC2
SOFTWARE
TYR H:226 , TYR H:274 , THR H:324 , HOH H:606
BINDING SITE FOR RESIDUE CL H 402
37
HC3
SOFTWARE
GLY E:101 , ILE E:102 , VAL H:97 , ALA H:100 , ILE H:102 , THR H:103
BINDING SITE FOR RESIDUE CL H 403
38
HC4
SOFTWARE
MET H:309 , ILE H:329 , PRO H:330 , TRP H:331 , ILE H:332 , LYS H:333 , HOH H:511
BINDING SITE FOR RESIDUE CL H 404
39
HC5
SOFTWARE
ASP H:203 , GLU H:229 , GLU H:255 , 0YR H:409 , HOH H:509
BINDING SITE FOR RESIDUE MG H 405
40
HC6
SOFTWARE
ASP G:224 , PRO H:180 , ASN H:181 , ARG H:215 , ALA H:219 , HOH H:550
BINDING SITE FOR RESIDUE GOL H 406
41
HC7
SOFTWARE
ARG H:299 , HOH H:592 , HOH H:809 , ARG I:90 , HOH I:660 , TRP L:233
BINDING SITE FOR RESIDUE GOL H 407
42
HC8
SOFTWARE
ARG H:90 , HOH H:529 , HOH H:701 , HOH H:878
BINDING SITE FOR RESIDUE GOL H 408
43
HC9
SOFTWARE
TRP E:96 , ASP H:22 , HIS H:25 , TRP H:30 , HIS H:52 , TRP H:147 , LYS H:172 , LYS H:174 , ASP H:203 , ASN H:205 , GLU H:229 , GLU H:255 , HIS H:305 , GLU H:327 , MG H:405 , HOH H:509 , HOH H:823
BINDING SITE FOR RESIDUE 0YR H 409
44
IC1
SOFTWARE
TYR I:226 , TYR I:274 , THR I:324 , HOH I:673
BINDING SITE FOR RESIDUE CL I 401
45
IC2
SOFTWARE
VAL I:97 , ALA I:100 , GLY I:101 , ILE I:102 , THR I:103 , GLY L:101 , ILE L:102
BINDING SITE FOR RESIDUE CL I 402
46
IC3
SOFTWARE
MET I:309 , ILE I:329 , PRO I:330 , TRP I:331 , ILE I:332 , LYS I:333 , HOH I:504
BINDING SITE FOR RESIDUE CL I 403
47
IC4
SOFTWARE
ASP I:203 , GLU I:229 , GLU I:255 , 0YR I:406 , HOH I:534
BINDING SITE FOR RESIDUE MG I 404
48
IC5
SOFTWARE
PRO I:180 , ASN I:181 , ARG I:215 , PHE I:216 , ALA I:219 , HOH I:602 , ASP M:224
BINDING SITE FOR RESIDUE GOL I 405
49
IC6
SOFTWARE
ASP I:22 , HIS I:25 , TRP I:30 , HIS I:52 , TRP I:147 , LYS I:172 , LYS I:174 , ASP I:203 , ASN I:205 , GLU I:229 , GLU I:255 , HIS I:305 , GLU I:327 , MG I:404 , HOH I:534 , HOH I:761 , TRP L:96
BINDING SITE FOR RESIDUE 0YR I 406
50
JC7
SOFTWARE
TYR L:226 , TYR L:274 , THR L:324 , HOH L:650
BINDING SITE FOR RESIDUE CL L 401
51
JC8
SOFTWARE
MET L:309 , ILE L:329 , PRO L:330 , TRP L:331 , ILE L:332 , LYS L:333 , HOH L:501
BINDING SITE FOR RESIDUE CL L 402
52
JC9
SOFTWARE
GLY I:101 , ILE I:102 , VAL L:97 , ALA L:100 , ILE L:102 , THR L:103
BINDING SITE FOR RESIDUE CL L 403
53
KC1
SOFTWARE
ASP L:203 , GLU L:229 , GLU L:255 , 0YR L:407 , HOH L:513
BINDING SITE FOR RESIDUE MG L 404
54
KC2
SOFTWARE
ASP H:224 , PRO L:180 , ASN L:181 , ARG L:215 , PHE L:216 , ALA L:219 , HOH L:580
BINDING SITE FOR RESIDUE GOL L 405
55
KC3
SOFTWARE
TRP C:233 , ARG L:299 , HOH L:547 , ARG M:90 , HOH M:696
BINDING SITE FOR RESIDUE GOL L 406
56
KC4
SOFTWARE
TRP I:96 , ASP L:22 , HIS L:25 , TRP L:30 , HIS L:52 , TRP L:147 , LYS L:172 , LYS L:174 , ASP L:203 , ASN L:205 , GLU L:229 , GLU L:255 , HIS L:305 , GLU L:327 , MG L:404 , HOH L:513
BINDING SITE FOR RESIDUE 0YR L 407
57
KC5
SOFTWARE
ASP L:268 , HIS L:298 , ASP M:268 , HIS M:298
BINDING SITE FOR RESIDUE CA M 401
58
KC6
SOFTWARE
TYR M:226 , TYR M:274 , THR M:324 , HOH M:615
BINDING SITE FOR RESIDUE CL M 402
59
KC7
SOFTWARE
MET M:309 , ILE M:329 , PRO M:330 , TRP M:331 , ILE M:332 , LYS M:333 , HOH M:503
BINDING SITE FOR RESIDUE CL M 403
60
KC8
SOFTWARE
ALA G:370 , VAL G:371 , ALA M:370 , VAL M:371
BINDING SITE FOR RESIDUE CL M 404
61
KC9
SOFTWARE
ASP M:203 , GLU M:229 , GLU M:255 , 0YR M:407 , HOH M:515
BINDING SITE FOR RESIDUE MG M 405
62
LC1
SOFTWARE
ASP B:224 , PRO M:180 , ASN M:181 , ARG M:215 , PHE M:216 , ALA M:219 , HOH M:617
BINDING SITE FOR RESIDUE GOL M 406
63
LC2
SOFTWARE
TRP C:96 , ASP M:22 , HIS M:25 , TRP M:30 , HIS M:52 , TRP M:147 , LYS M:172 , LYS M:174 , ASP M:203 , ASN M:205 , GLU M:229 , GLU M:255 , HIS M:305 , GLU M:327 , MG M:405 , HOH M:515
BINDING SITE FOR RESIDUE 0YR M 407
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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CATH Domains
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Pfam Domains
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Atom Selection
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Chain B
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Chain M
Asymmetric Unit 1
Rendering
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Molecule Coloring
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by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
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Miscellaneous
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Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
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Asym.Unit (1.0 MB)
Header - Asym.Unit
Biol.Unit 1 (539 KB)
Header - Biol.Unit 1
Biol.Unit 2 (531 KB)
Header - Biol.Unit 2
Biol.Unit 3 (536 KB)
Header - Biol.Unit 3
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