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4GZQ
Biol. Unit 1
Info
Asym.Unit (74 KB)
Biol.Unit 1 (266 KB)
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(1)
Title
:
N2 NEURAMINIDASE OF A/TANZANIA/205/2010 H3N2 IN COMPLEX WITH SIALIC ACID
Authors
:
X. Zhu, I. A. Wilson
Date
:
06 Sep 12 (Deposition) - 17 Oct 12 (Release) - 05 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Beta-Propella, Influenza Virus, Neuraminidase, Hemagglutinin, Hemadsorption, Viral Infection, Sialic Acid Receptor, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Zhu, R. Mcbride, C. M. Nycholat, W. Yu, J. C. Paulson, I. A. Wilson
Influenza Virus Neuraminidases With Reduced Enzymatic Activity That Avidly Bind Sialic Acid Receptors.
J. Virol. V. 86 13371 2012
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Hetero Components
(4, 36)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
5a: O-SIALIC ACID (SIAa)
View:
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No.
Name
Count
Type
Full Name
1
BMA
4
Ligand/Ion
BETA-D-MANNOSE
2
CA
-1
Ligand/Ion
CALCIUM ION
3
MAN
8
Ligand/Ion
ALPHA-D-MANNOSE
4
NAG
20
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
SIA
4
Ligand/Ion
O-SIALIC ACID
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:118 , GLU A:119 , ASP A:151 , ARG A:152 , ARG A:224 , ALA A:246 , GLU A:276 , ARG A:292 , ARG A:371 , TYR A:406 , HOH A:626 , HOH A:760
BINDING SITE FOR RESIDUE SIA A 501
02
AC2
SOFTWARE
ASN A:200 , TYR A:453 , GLY A:454 , THR A:455 , NAG A:503 , HOH A:775
BINDING SITE FOR RESIDUE NAG A 502
03
AC3
SOFTWARE
ASN A:393 , ARG A:394 , NAG A:502 , BMA A:504 , HOH A:797
BINDING SITE FOR RESIDUE NAG A 503
04
AC4
SOFTWARE
GLN A:391 , ARG A:394 , NAG A:503 , MAN A:505 , MAN A:506 , HOH A:666
BINDING SITE FOR RESIDUE BMA A 504
05
AC5
SOFTWARE
GLN A:391 , BMA A:504 , HOH A:713
BINDING SITE FOR RESIDUE MAN A 505
06
AC6
SOFTWARE
BMA A:504 , HOH A:602 , HOH A:783
BINDING SITE FOR RESIDUE MAN A 506
07
AC7
SOFTWARE
ASN A:146
BINDING SITE FOR RESIDUE NAG A 507
08
AC8
SOFTWARE
ASN A:234
BINDING SITE FOR RESIDUE NAG A 508
09
AC9
SOFTWARE
ASN A:367 , GLU A:368 , SER A:370 , ARG A:400 , HOH A:659
BINDING SITE FOR RESIDUE NAG A 509
10
BC1
SOFTWARE
ASP A:293 , GLY A:297 , ASP A:324 , GLY A:345 , HIS A:347 , HOH A:725
BINDING SITE FOR RESIDUE CA A 510
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4gzqa_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
6-bladed beta-propeller
(327)
Superfamily
:
Sialidases
(238)
Family
:
Sialidases (neuraminidases)
(178)
Protein domain
:
automated matches
(38)
Influenza a virus [TaxId: 119210]
(7)
1a
d4gzqa_
A:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asymmetric Unit 3
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Asym.Unit (74 KB)
Header - Asym.Unit
Biol.Unit 1 (266 KB)
Header - Biol.Unit 1
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