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4GXF
Asym. Unit
Info
Asym.Unit (147 KB)
Biol.Unit 1 (141 KB)
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(1)
Title
:
ROLE OF THE BIRADICAL INTERMEDIATE OBSERVED DURING THE TURNOVER OF SLAC: A TWO-DOMAIN LACCASE FROM STREPTOMYCES COELICOLOR
Authors
:
I. Nederlof, A. Gupta, G. W. Canters
Date
:
04 Sep 12 (Deposition) - 19 Sep 12 (Release) - 10 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.73
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Two-Domain Laccase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Gupta, I. Nederlof, S. Sottini, A. W. Tepper, E. J. Groenen, E. A. Thomassen, G. W. Canters
Involvement Of Tyr108 In The Enzyme Mechanism Of The Small Laccase From Streptomyces Coelicolor
J. Am. Chem. Soc. V. 134 18213 2012
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Hetero Components
(3, 25)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
1e: COPPER (II) ION (CUe)
1f: COPPER (II) ION (CUf)
1g: COPPER (II) ION (CUg)
1h: COPPER (II) ION (CUh)
1i: COPPER (II) ION (CUi)
1j: COPPER (II) ION (CUj)
1k: COPPER (II) ION (CUk)
1l: COPPER (II) ION (CUl)
2a: OXYGEN ATOM (Oa)
2b: OXYGEN ATOM (Ob)
2c: OXYGEN ATOM (Oc)
3a: TETRAETHYLENE GLYCOL (PG4a)
3b: TETRAETHYLENE GLYCOL (PG4b)
3c: TETRAETHYLENE GLYCOL (PG4c)
3d: TETRAETHYLENE GLYCOL (PG4d)
3e: TETRAETHYLENE GLYCOL (PG4e)
3f: TETRAETHYLENE GLYCOL (PG4f)
3g: TETRAETHYLENE GLYCOL (PG4g)
3h: TETRAETHYLENE GLYCOL (PG4h)
3i: TETRAETHYLENE GLYCOL (PG4i)
3j: TETRAETHYLENE GLYCOL (PG4j)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CU
12
Ligand/Ion
COPPER (II) ION
2
O
3
Ligand/Ion
OXYGEN ATOM
3
PG4
10
Ligand/Ion
TETRAETHYLENE GLYCOL
[
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Sites
(25, 25)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:231 , CYS A:288 , HIS A:293
BINDING SITE FOR RESIDUE CU A 401
02
AC2
SOFTWARE
HIS A:236 , HIS A:287 , CU A:403 , HIS C:158 , O C:402
BINDING SITE FOR RESIDUE CU A 402
03
AC3
SOFTWARE
HIS A:234 , HIS A:236 , CU A:402 , HIS C:102 , HIS C:104 , CU C:401 , O C:402
BINDING SITE FOR RESIDUE CU A 403
04
AC4
SOFTWARE
LYS A:136 , ARG A:146 , PG4 A:408 , HOH A:563
BINDING SITE FOR RESIDUE PG4 A 404
05
AC5
SOFTWARE
HIS A:104 , HIS A:156 , CU A:406 , O A:407 , HIS B:289
BINDING SITE FOR RESIDUE CU A 405
06
AC6
SOFTWARE
HIS A:102 , HIS A:104 , CU A:405 , O A:407 , HIS B:234 , HIS B:236
BINDING SITE FOR RESIDUE CU A 406
07
AC7
SOFTWARE
HIS A:102 , HIS A:156 , HIS A:158 , CU A:405 , CU A:406 , HOH A:533 , HIS B:234 , HIS B:236 , HIS B:287 , HIS B:289 , CU B:402
BINDING SITE FOR RESIDUE O A 407
08
AC8
SOFTWARE
GLY A:84 , ASP A:107 , ARG A:133 , THR A:134 , HIS A:135 , LYS A:136 , ARG A:146 , PG4 A:404 , GLY B:278 , HOH B:524
BINDING SITE FOR RESIDUE PG4 A 408
09
AC9
SOFTWARE
ARG A:49 , LEU A:51 , LEU A:78 , GLU A:80
BINDING SITE FOR RESIDUE PG4 A 409
10
BC1
SOFTWARE
HIS B:231 , CYS B:288 , HIS B:293 , MET B:298
BINDING SITE FOR RESIDUE CU B 401
11
BC2
SOFTWARE
HIS A:158 , O A:407 , HIS B:236 , HIS B:287
BINDING SITE FOR RESIDUE CU B 402
12
BC3
SOFTWARE
LYS B:136 , ARG B:146 , GLU C:277
BINDING SITE FOR RESIDUE PG4 B 403
13
BC4
SOFTWARE
GLN B:62 , ALA B:72 , VAL B:74 , ASN B:202 , LYS B:204 , HOH C:599
BINDING SITE FOR RESIDUE PG4 B 404
14
BC5
SOFTWARE
HIS B:104 , HIS B:156 , O B:406 , HIS C:289 , CU C:405
BINDING SITE FOR RESIDUE CU B 405
15
BC6
SOFTWARE
HIS B:102 , HIS B:156 , HIS B:158 , CU B:405 , HOH B:536 , HIS C:234 , HIS C:236 , HIS C:287 , HIS C:289 , CU C:404 , CU C:405
BINDING SITE FOR RESIDUE O B 406
16
BC7
SOFTWARE
LEU B:78 , GLU B:80
BINDING SITE FOR RESIDUE PG4 B 407
17
BC8
SOFTWARE
HIS A:289 , CU A:403 , HIS C:102 , HIS C:104 , HIS C:156 , O C:402
BINDING SITE FOR RESIDUE CU C 401
18
BC9
SOFTWARE
HIS A:236 , HIS A:289 , CU A:402 , CU A:403 , HIS C:102 , HIS C:156 , HIS C:158 , CU C:401
BINDING SITE FOR RESIDUE O C 402
19
CC1
SOFTWARE
HIS C:231 , CYS C:288 , HIS C:293 , MET C:298
BINDING SITE FOR RESIDUE CU C 403
20
CC2
SOFTWARE
HIS B:158 , O B:406 , HOH B:536 , HIS C:236 , HIS C:287 , CU C:405
BINDING SITE FOR RESIDUE CU C 404
21
CC3
SOFTWARE
HIS B:102 , HIS B:104 , CU B:405 , O B:406 , HIS C:234 , HIS C:236 , CU C:404
BINDING SITE FOR RESIDUE CU C 405
22
CC4
SOFTWARE
LYS C:136 , ARG C:139 , ARG C:146 , PG4 C:408
BINDING SITE FOR RESIDUE PG4 C 406
23
CC5
SOFTWARE
GLN C:62 , SER C:73 , VAL C:74 , ASN C:202 , HOH C:546
BINDING SITE FOR RESIDUE PG4 C 407
24
CC6
SOFTWARE
ARG C:133 , THR C:134 , HIS C:135 , LYS C:136 , ARG C:146 , PG4 C:406
BINDING SITE FOR RESIDUE PG4 C 408
25
CC7
SOFTWARE
ARG C:49 , LEU C:78 , ILE C:79 , GLU C:80
BINDING SITE FOR RESIDUE PG4 C 409
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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Asym.Unit (147 KB)
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