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4GVS
Asym. Unit
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Asym.Unit (169 KB)
Biol.Unit 1 (164 KB)
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(1)
Title
:
X-RAY STRUCTURE OF THE ARCHAEOGLOBUS FULGIDUS METHENYL-TETRAHYDROMETHANOPTERIN CYCLOHYDROLASE IN COMPLEX WITH N5-FORMYL-TETRAHYDROMETHANOPTERIN
Authors
:
V. Upadhyay, U. Demmer, E. Warkentin, J. Moll, S. Shima, U. Ermler
Date
:
31 Aug 12 (Deposition) - 31 Oct 12 (Release) - 05 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
N5-Formyl-Tetrahydromethanopterin, Hydrolase
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Reference
:
V. Upadhyay, U. Demmer, E. Warkentin, J. Moll, S. Shima, U. Ermler
Structure And Catalytic Mechanism Of N(5), N(10)-Methenyl-Tetrahydromethanopterin Cyclohydrolase.
Biochemistry V. 51 8435 2012
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Hetero Components
(1, 1)
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All Hetero Components
1a: 1-[4-({(1R)-1-[(6S,7R)-2-AMINO-5-F... (F4Ma)
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1
F4M
1
Ligand/Ion
1-[4-({(1R)-1-[(6S,7R)-2-AMINO-5-FORMYL-7-METHYL-4-OXO-1,4,5,6,7,8-HEXAHYDROPTERIDIN-6-YL]ETHYL}AMINO)PHENYL]-1-DEOXY-5-O-{5-O-[(R)-{[(1R)-1,3-DICARBOXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]-ALPHA-D-RIBOFURANOSYL}-D-RIBITOL
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Sites
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1: AC1 (SOFTWARE)
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1
AC1
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LYS B:94 , ALA B:95 , MET B:107 , GLU B:140 , ILE B:180 , ARG B:183 , GLN B:186 , THR B:187 , PHE B:190 , MET B:222 , ASN B:226 , PHE B:272 , PHE B:280
BINDING SITE FOR RESIDUE F4M B 401
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SCOP Domains
(1, 3)
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1a: SCOP_d4gvsa_ (A:)
1b: SCOP_d4gvsb_ (B:)
1c: SCOP_d4gvsc_ (C:)
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Class
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Alpha and beta proteins (a+b)
(23004)
Fold
:
Methenyltetrahydromethanopterin cyclohydrolase
(5)
Superfamily
:
Methenyltetrahydromethanopterin cyclohydrolase
(5)
Family
:
automated matches
(4)
Protein domain
:
automated matches
(4)
Archaeoglobus fulgidus [TaxId: 224325]
(3)
1a
d4gvsa_
A:
1b
d4gvsb_
B:
1c
d4gvsc_
C:
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