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4GOY
Asym. Unit
Info
Asym.Unit (331 KB)
Biol.Unit 1 (163 KB)
Biol.Unit 2 (166 KB)
Biol.Unit 3 (324 KB)
Biol.Unit 4 (327 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF HUMAN FASCIN 1 K41A MUTANT
Authors
:
S. Y. Yang, F. K. Huang, J. Huang, S. Chen, J. Jakoncic, A. Leo-Macias, R. Avalos, L. Chen, J. J. Zhang, X. Y. Huang
Date
:
20 Aug 12 (Deposition) - 28 Nov 12 (Release) - 30 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: B (2x)
Keywords
:
Beta-Trefoil, Actin Bundling Protein, Cancer, Metastasis, Cell Migration, Actin-Binding, Phosphoprotein, Protein Binding, Actin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Yang, F. K. Huang, J. Huang, S. Chen, J. Jakoncic, A. Leo-Macias, R. Diaz-Avalos, L. Chen, J. J. Zhang, X. Y. Huang
Molecular Mechanism Of Fascin Function In Filopodial Formation.
J. Biol. Chem. V. 288 274 2013
[
close entry info
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Hetero Components
(4, 25)
Info
All Hetero Components
1a: BROMIDE ION (BRa)
1b: BROMIDE ION (BRb)
1c: BROMIDE ION (BRc)
1d: BROMIDE ION (BRd)
1e: BROMIDE ION (BRe)
1f: BROMIDE ION (BRf)
1g: BROMIDE ION (BRg)
1h: BROMIDE ION (BRh)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
2i: CHLORIDE ION (CLi)
2j: CHLORIDE ION (CLj)
3a: 2,3-DIHYDROXY-1,4-DITHIOBUTANE (DTTa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BR
8
Ligand/Ion
BROMIDE ION
2
CL
10
Ligand/Ion
CHLORIDE ION
3
DTT
1
Ligand/Ion
2,3-DIHYDROXY-1,4-DITHIOBUTANE
4
GOL
6
Ligand/Ion
GLYCEROL
[
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Sites
(25, 25)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:82 , GLY A:86 , ASP A:88
BINDING SITE FOR RESIDUE BR A 501
02
AC2
SOFTWARE
ARG A:167 , ASP A:168 , VAL A:169
BINDING SITE FOR RESIDUE BR A 502
03
AC3
SOFTWARE
ALA A:370
BINDING SITE FOR RESIDUE BR A 503
04
AC4
SOFTWARE
ASP B:420 , HOH B:601
BINDING SITE FOR RESIDUE CL A 504
05
AC5
SOFTWARE
PRO A:128
BINDING SITE FOR RESIDUE CL A 505
06
AC6
SOFTWARE
ASP A:420
BINDING SITE FOR RESIDUE CL A 506
07
AC7
SOFTWARE
CYS A:260 , TYR A:458 , ASN A:459
BINDING SITE FOR RESIDUE CL A 507
08
AC8
SOFTWARE
TRP A:340 , ASP A:342 , ARG A:344 , ILE A:345 , MET A:378 , GLY A:421 , TYR A:423 , PHE A:452 , PHE A:453
BINDING SITE FOR RESIDUE GOL A 508
09
AC9
SOFTWARE
LEU A:380 , ILE A:381 , ASN A:382 , ARG A:383 , PRO A:384 , LEU A:416 , PHE A:418 , TYR A:423
BINDING SITE FOR RESIDUE GOL A 509
10
BC1
SOFTWARE
THR A:326 , ALA A:327 , SER A:328 , SER A:329 , ASN A:331 , HOH A:726 , GLN B:415 , LYS B:426 , SER B:428 , GLY B:430
BINDING SITE FOR RESIDUE GOL A 510
11
BC2
SOFTWARE
ARG B:82 , GLY B:86 , ASP B:88
BINDING SITE FOR RESIDUE BR B 501
12
BC3
SOFTWARE
TYR B:230 , LYS B:244
BINDING SITE FOR RESIDUE BR B 502
13
BC4
SOFTWARE
ARG B:167 , ASP B:168
BINDING SITE FOR RESIDUE BR B 503
14
BC5
SOFTWARE
ARG B:82 , GLU B:83
BINDING SITE FOR RESIDUE BR B 504
15
BC6
SOFTWARE
ARG B:90
BINDING SITE FOR RESIDUE BR B 505
16
BC7
SOFTWARE
THR A:434 , VAL A:435 , VAL A:449 , ARG B:110 , GLN B:124
BINDING SITE FOR RESIDUE CL B 506
17
BC8
SOFTWARE
GLN B:182 , ARG B:185
BINDING SITE FOR RESIDUE CL B 507
18
BC9
SOFTWARE
LYS B:399
BINDING SITE FOR RESIDUE CL B 508
19
CC1
SOFTWARE
GLY B:235
BINDING SITE FOR RESIDUE CL B 509
20
CC2
SOFTWARE
PHE A:29 , ARG B:100 , PRO B:128
BINDING SITE FOR RESIDUE CL B 510
21
CC3
SOFTWARE
ARG B:217 , SER B:218 , LYS B:250
BINDING SITE FOR RESIDUE CL B 511
22
CC4
SOFTWARE
LYS B:379 , LEU B:380 , ILE B:381 , ARG B:383 , PRO B:384 , LEU B:416 , PHE B:418 , HOH B:630
BINDING SITE FOR RESIDUE GOL B 512
23
CC5
SOFTWARE
LEU B:40 , ILE B:45 , ALA B:137 , ARG B:389 , HIS B:392 , GLY B:393 , ARG B:408 , SER B:409 , HOH B:679 , HOH B:792
BINDING SITE FOR RESIDUE GOL B 513
24
CC6
SOFTWARE
ASP B:342 , ARG B:344 , ILE B:345 , GLY B:421 , TYR B:423 , PHE B:452 , PHE B:453 , HOH B:627 , HOH B:773
BINDING SITE FOR RESIDUE GOL B 514
25
CC7
SOFTWARE
GLY A:114 , THR A:115 , ARG A:118 , HOH A:804 , PHE B:29 , GLY B:30 , LYS B:32 , ARG B:468
BINDING SITE FOR RESIDUE DTT B 515
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d4goya1 (A:7-140)
1b: SCOP_d4goya2 (A:141-259)
1c: SCOP_d4goya3 (A:260-382)
1d: SCOP_d4goya4 (A:383-493)
1e: SCOP_d4goyb1 (B:8-140)
1f: SCOP_d4goyb2 (B:141-259)
1g: SCOP_d4goyb3 (B:260-382)
1h: SCOP_d4goyb4 (B:383-493)
View:
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Classes
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)
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Superfamilies
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Actin-crosslinking proteins
(8)
Family
:
Fascin
(6)
Protein domain
:
Fascin
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d4goya1
A:7-140
1b
d4goya2
A:141-259
1c
d4goya3
A:260-382
1d
d4goya4
A:383-493
1e
d4goyb1
B:8-140
1f
d4goyb2
B:141-259
1g
d4goyb3
B:260-382
1h
d4goyb4
B:383-493
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
[
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Atom Selection
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Protein
Nucleic
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Hetero
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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Show PDB file:
Asym.Unit (331 KB)
Header - Asym.Unit
Biol.Unit 1 (163 KB)
Header - Biol.Unit 1
Biol.Unit 2 (166 KB)
Header - Biol.Unit 2
Biol.Unit 3 (324 KB)
Header - Biol.Unit 3
Biol.Unit 4 (327 KB)
Header - Biol.Unit 4
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