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4GHL
Asym. Unit
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Asym.Unit (219 KB)
Biol.Unit 1 (200 KB)
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(1)
Title
:
STRUCTURAL BASIS FOR MARBURG VIRUS VP35 MEDIATE IMMUNE EVASION MECHANISMS
Authors
:
P. Ramanan, D. M. Borek, Z. Otwinowski, D. W. Leung, G. K. Amarasinghe
Date
:
07 Aug 12 (Deposition) - 28 Nov 12 (Release) - 26 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.02
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Protein-Rna Complex, Vp35, Ifn Inhibitor, Rna Binding Protein, Interferon Antagonism, Double Stranded Rna, Transcription, Viral Protein-Rna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Ramanan, M. R. Edwards, R. S. Shabman, D. W. Leung, A. C. Endlich-Frazier, D. M. Borek, Z. Otwinowski, G. Liu, J. Huh, C. F. Basler, G. K. Amarasinghe
Structural Basis For Marburg Virus Vp35-Mediated Immune Evasion Mechanisms.
Proc. Natl. Acad. Sci. Usa V. 109 20661 2012
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Hetero Components
(3, 19)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
3g: MAGNESIUM ION (MGg)
3h: MAGNESIUM ION (MGh)
3i: MAGNESIUM ION (MGi)
3j: MAGNESIUM ION (MGj)
3k: MAGNESIUM ION (MGk)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
4
Ligand/Ion
CHLORIDE ION
2
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
3
MG
11
Ligand/Ion
MAGNESIUM ION
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
C E:17 , U E:18
BINDING SITE FOR RESIDUE MG E 101
02
AC2
SOFTWARE
A E:1 , U E:18
BINDING SITE FOR RESIDUE MG E 102
03
AC3
SOFTWARE
U E:16
BINDING SITE FOR RESIDUE MG E 103
04
AC4
SOFTWARE
A F:10 , U F:11
BINDING SITE FOR RESIDUE MG F 101
05
AC5
SOFTWARE
C F:13 , U F:14 , HOH F:210
BINDING SITE FOR RESIDUE MG F 102
06
AC6
SOFTWARE
U F:14 , G F:15
BINDING SITE FOR RESIDUE MG F 103
07
AC7
SOFTWARE
LYS A:287 , GLU A:320 , GLU C:320
BINDING SITE FOR RESIDUE MG A 401
08
AC8
SOFTWARE
ILE A:284 , ARG A:285
BINDING SITE FOR RESIDUE EDO A 402
09
AC9
SOFTWARE
ASN A:225 , PRO A:293 , ARG A:294 , PRO A:295 , HOH A:588 , HOH B:570
BINDING SITE FOR RESIDUE EDO A 403
10
BC1
SOFTWARE
LEU B:221 , GLY B:223 , HOH B:504 , HOH B:569
BINDING SITE FOR RESIDUE MG B 401
11
BC2
SOFTWARE
LYS B:241
BINDING SITE FOR RESIDUE CL B 404
12
BC3
SOFTWARE
HIS A:198 , GLU A:201 , ALA B:302 , ARG B:325 , HOH B:514
BINDING SITE FOR RESIDUE EDO B 405
13
BC4
SOFTWARE
HOH A:593 , ARG C:301 , LYS C:328 , A E:8
BINDING SITE FOR RESIDUE MG C 401
14
BC5
SOFTWARE
PHE C:218 , LEU C:221 , GLY C:223 , HIS C:229 , HOH C:554
BINDING SITE FOR RESIDUE MG C 402
15
BC6
SOFTWARE
ARG C:285
BINDING SITE FOR RESIDUE CL C 403
16
BC7
SOFTWARE
ARG C:285 , HOH C:501
BINDING SITE FOR RESIDUE EDO C 404
17
BC8
SOFTWARE
PHE D:289 , GLN D:290
BINDING SITE FOR RESIDUE MG D 401
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
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Atom Selection
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Chain E
Chain F
Asymmetric Unit 1
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Asym.Unit (219 KB)
Header - Asym.Unit
Biol.Unit 1 (200 KB)
Header - Biol.Unit 1
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