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4GEG
Asym. Unit
Info
Asym.Unit (136 KB)
Biol.Unit 1 (46 KB)
Biol.Unit 2 (46 KB)
Biol.Unit 3 (46 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF E.COLI MENH Y85F MUTANT
Authors
:
J. M. Johnston, E. N. Baker, Z. Guo, M. Jiang
Date
:
01 Aug 12 (Deposition) - 08 May 13 (Release) - 04 Feb 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.49
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: B (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: C (1x)
Keywords
:
Menaquinone Biosynthesis, Alpha Beta Hydrolase, 2-Succinyl-6-Hydroxy- 2, 4-Cyclohexadiene-1-Carboxylate Synthase, Menh Y85F Mutant, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Johnston, M. Jiang, Z. Guo, E. N. Baker
Crystal Structures Of E. Coli Native Menh And Two Active Site Mutants.
Plos One V. 8 61325 2013
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Hetero Components
(4, 23)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
2a: 1,2-ETHANEDIOL (EDOa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
4i: SULFATE ION (SO4i)
4j: SULFATE ION (SO4j)
4k: SULFATE ION (SO4k)
4l: SULFATE ION (SO4l)
4m: SULFATE ION (SO4m)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
7
Ligand/Ion
CHLORIDE ION
2
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
3
GOL
2
Ligand/Ion
GLYCEROL
4
SO4
13
Ligand/Ion
SULFATE ION
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:86 , LEU A:87 , ARG A:90 , EDO A:306 , HOH A:452 , HOH A:503 , HOH A:526 , HOH A:540
BINDING SITE FOR RESIDUE SO4 A 301
02
AC2
SOFTWARE
GLY A:60 , PHE A:61 , ASP A:62 , HOH A:401 , HOH A:529
BINDING SITE FOR RESIDUE SO4 A 302
03
AC3
SOFTWARE
ARG A:198 , ALA A:201 , PHE A:202 , TYR A:203 , HOH A:511
BINDING SITE FOR RESIDUE SO4 A 303
04
AC4
SOFTWARE
ALA A:7 , LYS A:8 , HIS A:9 , HOH A:493
BINDING SITE FOR RESIDUE SO4 A 304
05
AC5
SOFTWARE
TYR A:148 , ARG A:168 , ASN A:233
BINDING SITE FOR RESIDUE CL A 305
06
AC6
SOFTWARE
ARG A:124 , VAL A:152 , PHE A:213 , SO4 A:301 , HOH A:418
BINDING SITE FOR RESIDUE EDO A 306
07
AC7
SOFTWARE
SER B:86 , LEU B:87 , ARG B:90 , ARG B:124 , HOH B:437 , HOH B:441 , HOH B:534
BINDING SITE FOR RESIDUE SO4 B 301
08
AC8
SOFTWARE
ARG B:209 , ARG B:229
BINDING SITE FOR RESIDUE SO4 B 302
09
AC9
SOFTWARE
GLU B:163 , LEU B:167 , ARG B:236 , HOH B:491
BINDING SITE FOR RESIDUE SO4 B 303
10
BC1
SOFTWARE
HOH A:493 , ARG B:198 , ALA B:201 , PHE B:202
BINDING SITE FOR RESIDUE SO4 B 304
11
BC2
SOFTWARE
TYR B:148 , ARG B:168 , ASN B:233
BINDING SITE FOR RESIDUE CL B 305
12
BC3
SOFTWARE
HIS B:9 , TYR B:75 , PRO B:151 , VAL B:152 , LYS B:212
BINDING SITE FOR RESIDUE GOL B 306
13
BC4
SOFTWARE
GLN B:160
BINDING SITE FOR RESIDUE CL B 307
14
BC5
SOFTWARE
SER C:86 , ARG C:90 , ARG C:124 , HOH C:440 , HOH C:443 , HOH C:474 , HOH C:478 , HOH C:511
BINDING SITE FOR RESIDUE SO4 C 301
15
BC6
SOFTWARE
LYS C:8 , HIS C:9
BINDING SITE FOR RESIDUE SO4 C 302
16
BC7
SOFTWARE
ALA C:101 , GLY C:102
BINDING SITE FOR RESIDUE SO4 C 303
17
BC8
SOFTWARE
ARG C:236
BINDING SITE FOR RESIDUE SO4 C 304
18
BC9
SOFTWARE
SER C:0 , MET C:1 , ARG C:126 , GLN C:130
BINDING SITE FOR RESIDUE SO4 C 305
19
CC1
SOFTWARE
GLY B:173 , HOH B:429 , GLY C:173
BINDING SITE FOR RESIDUE CL C 306
20
CC2
SOFTWARE
TYR C:148 , ARG C:168 , ASN C:233
BINDING SITE FOR RESIDUE CL C 307
21
CC3
SOFTWARE
ARG C:69 , GLY C:99 , LEU C:100 , ALA C:101 , HOH C:505 , HOH C:512
BINDING SITE FOR RESIDUE GOL C 308
22
CC4
SOFTWARE
HOH C:491 , HOH C:499 , HOH C:533
BINDING SITE FOR RESIDUE CL C 309
23
CC5
SOFTWARE
LEU C:78 , ASP C:79
BINDING SITE FOR RESIDUE CL C 310
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (136 KB)
Header - Asym.Unit
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