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Biol. Unit 1
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Asym.Unit (255 KB)
Biol.Unit 1 (125 KB)
Biol.Unit 2 (125 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF JMJD2A COMPLEXED WITH INHIBITOR
Authors
:
O. N. F. King, T. Krojer, C. H. Arrowsmith, A. Edwards, C. Bountra, M. A. M C. J. Schofield, Structural Genomics Consortium (Sgc)
Date
:
31 Jul 12 (Deposition) - 15 Aug 12 (Release) - 03 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.33
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Structural Genomics, Structural Genomics Consortium, Sgc, Oxidoreductase, Jmjc Domain, Chromatin Regulator, Dioxygenase, Transcription, Demethylation, Iron, 2-Oxoglutarate, Alpha- Ketoglutarate, Nucleus, Oxidoreductase-Oxidoreductase Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. N. F. King, T. Krojer, Arrowsmith C. H. , Edwards A. , Bountra C. , M. A. Mcdonough, C. J. Schofield, Structural Genomics Consortium (Sgc)
Crystal Structure Of Jmjd2A Complexed With Inhibitor
To Be Published
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 2-(1H-PYRAZOL-3-YL)PYRIDINE-4-CARB... (0WSa)
1b: 2-(1H-PYRAZOL-3-YL)PYRIDINE-4-CARB... (0WSb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
3a: NICKEL (II) ION (NIa)
3b: NICKEL (II) ION (NIb)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
0WS
1
Ligand/Ion
2-(1H-PYRAZOL-3-YL)PYRIDINE-4-CARBOXYLIC ACID
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
NI
-1
Ligand/Ion
NICKEL (II) ION
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:188 , GLU A:190 , HIS A:276 , 0WS A:504 , HOH A:739
BINDING SITE FOR RESIDUE NI A 501
2
AC2
SOFTWARE
CYS A:234 , HIS A:240 , CYS A:306 , CYS A:308
BINDING SITE FOR RESIDUE ZN A 502
3
AC3
SOFTWARE
GLU A:235 , ALA A:236 , PHE A:237 , LEU A:238
BINDING SITE FOR RESIDUE CL A 503
4
AC4
SOFTWARE
TYR A:132 , TYR A:177 , PHE A:185 , HIS A:188 , GLU A:190 , LYS A:206 , TRP A:208 , LYS A:241 , HIS A:276 , NI A:501 , HOH A:642 , HOH A:739
BINDING SITE FOR RESIDUE 0WS A 504
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SAPs(SNPs)/Variants
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SCOP Domains
(1, 2)
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1a: SCOP_d4gd4a_ (A:)
1b: SCOP_d4gd4b_ (B:)
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Class
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All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
Clavaminate synthase-like
(197)
Family
:
Histone demethylase core
(19)
Protein domain
:
JMJD2A core
(13)
Human (Homo sapiens) [TaxId: 9606]
(13)
1a
d4gd4a_
A:
1b
d4gd4b_
B:
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CATH Domains
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Pfam Domains
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Asym.Unit (255 KB)
Header - Asym.Unit
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