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4G2C
Biol. Unit 1
Info
Asym.Unit (167 KB)
Biol.Unit 1 (83 KB)
Biol.Unit 2 (81 KB)
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(1)
Title
:
DYP2 FROM AMYCOLATOPSIS SP. ATCC 39116
Authors
:
M. E. Brown, T. Barros, M. C. Y. Chang
Date
:
11 Jul 12 (Deposition) - 24 Oct 12 (Release) - 02 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Dye Peroxidase, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. E. Brown, T. Barros, M. C. Chang
Identification And Characterization Of A Multifunctional Dy Peroxidase From A Lignin-Reactive Bacterium.
Acs Chem. Biol. V. 7 2074 2012
[
close entry info
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Hetero Components
(2, 26)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1aa: ACETATE ION (ACTaa)
1ab: ACETATE ION (ACTab)
1ac: ACETATE ION (ACTac)
1ad: ACETATE ION (ACTad)
1ae: ACETATE ION (ACTae)
1af: ACETATE ION (ACTaf)
1ag: ACETATE ION (ACTag)
1ah: ACETATE ION (ACTah)
1ai: ACETATE ION (ACTai)
1aj: ACETATE ION (ACTaj)
1ak: ACETATE ION (ACTak)
1al: ACETATE ION (ACTal)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
1j: ACETATE ION (ACTj)
1k: ACETATE ION (ACTk)
1l: ACETATE ION (ACTl)
1m: ACETATE ION (ACTm)
1n: ACETATE ION (ACTn)
1o: ACETATE ION (ACTo)
1p: ACETATE ION (ACTp)
1q: ACETATE ION (ACTq)
1r: ACETATE ION (ACTr)
1s: ACETATE ION (ACTs)
1t: ACETATE ION (ACTt)
1u: ACETATE ION (ACTu)
1v: ACETATE ION (ACTv)
1w: ACETATE ION (ACTw)
1x: ACETATE ION (ACTx)
1y: ACETATE ION (ACTy)
1z: ACETATE ION (ACTz)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
25
Ligand/Ion
ACETATE ION
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
MN
-1
Ligand/Ion
MANGANESE (II) ION
[
close Hetero Component info
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Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC3 (SOFTWARE)
29: DC4 (SOFTWARE)
30: EC1 (SOFTWARE)
31: EC2 (SOFTWARE)
32: EC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:186 , TYR A:190 , VAL A:191 , ASP A:192 , GLY A:193 , ARG A:194 , SER A:195 , GLN A:251 , HIS A:323 , ILE A:324 , THR A:327 , ASN A:328 , ARG A:330 , ARG A:348 , PHE A:378 , PHE A:389 , GLN A:393 , ILE A:417 , VAL A:447 , HOH A:611 , HOH A:628 , HOH A:629 , HOH A:710
BINDING SITE FOR RESIDUE HEM A 501
02
AC2
SOFTWARE
GLU A:260 , GLU A:286 , HOH A:677
BINDING SITE FOR RESIDUE MN A 502
03
AC3
SOFTWARE
GLU A:224 , LYS A:343 , SER A:383 , ASN A:387 , GLN A:388
BINDING SITE FOR RESIDUE ACT A 503
04
AC4
SOFTWARE
PRO A:302 , GLY A:304 , HOH A:633 , GLN B:294
BINDING SITE FOR RESIDUE ACT A 504
05
AC5
SOFTWARE
ARG A:208 , VAL A:214 , ASP A:218
BINDING SITE FOR RESIDUE ACT A 505
06
AC6
SOFTWARE
ASP A:216 , SER A:308 , ASP A:310 , ARG A:367
BINDING SITE FOR RESIDUE ACT A 506
07
AC7
SOFTWARE
GLY A:315 , PRO A:319 , PHE A:320 , LYS A:426 , TYR A:427 , ACT A:508 , HOH A:711
BINDING SITE FOR RESIDUE ACT A 507
08
AC8
SOFTWARE
SER A:409 , PRO A:411 , ACT A:507 , HOH A:746
BINDING SITE FOR RESIDUE ACT A 508
09
AC9
SOFTWARE
SER A:311 , ASP A:312 , LYS A:313 , LEU A:314 , HOH A:795 , ASP B:209 , ACT B:511
BINDING SITE FOR RESIDUE ACT A 509
10
BC1
SOFTWARE
ALA A:34 , ARG A:37
BINDING SITE FOR RESIDUE ACT A 510
11
BC2
SOFTWARE
LYS A:120 , GLY A:386 , GLU A:390 , PHE A:391 , GLN A:394 , HOH A:708
BINDING SITE FOR RESIDUE ACT A 511
12
BC3
SOFTWARE
ASP A:205 , ARG A:208 , ASP A:209
BINDING SITE FOR RESIDUE ACT A 512
13
BC4
SOFTWARE
ASP A:192 , GLY A:350 , HOH A:831
BINDING SITE FOR RESIDUE ACT A 513
14
BC5
SOFTWARE
ASN A:58 , LEU A:466
BINDING SITE FOR RESIDUE ACT A 514
15
BC6
SOFTWARE
ARG A:254 , GLU A:340 , LYS A:343
BINDING SITE FOR RESIDUE ACT A 515
16
BC7
SOFTWARE
ALA A:112 , PRO A:406 , ASP A:407 , GLY A:408
BINDING SITE FOR RESIDUE ACT A 516
17
BC8
SOFTWARE
GLU A:73 , VAL A:74 , VAL A:83 , GLY A:84 , HOH A:707
BINDING SITE FOR RESIDUE ACT A 517
18
BC9
SOFTWARE
ARG A:39 , LEU A:40 , THR A:41 , GLY A:174
BINDING SITE FOR RESIDUE ACT A 518
19
CC1
SOFTWARE
ALA A:98 , THR A:99 , ALA A:335 , ILE A:395 , ASN A:399
BINDING SITE FOR RESIDUE ACT A 519
20
CC2
SOFTWARE
THR A:9 , SER A:220 , ALA A:221 , PRO A:222 , ACT A:527 , HOH A:754
BINDING SITE FOR RESIDUE ACT A 520
21
CC3
SOFTWARE
PRO A:197 , PRO A:219 , SER A:220 , ALA A:221 , GLN A:225 , ARG A:342 , LEU A:345 , HOH A:809
BINDING SITE FOR RESIDUE ACT A 521
22
CC4
SOFTWARE
ALA A:34 , PRO A:197 , LEU A:198 , ARG A:349 , HOH A:768
BINDING SITE FOR RESIDUE ACT A 522
23
CC5
SOFTWARE
LEU A:413 , ARG A:422 , ALA A:423 , GLN A:425 , PRO A:442 , ILE A:443
BINDING SITE FOR RESIDUE ACT A 523
24
CC6
SOFTWARE
PRO A:108 , THR A:111 , ALA A:112 , ASP A:407
BINDING SITE FOR RESIDUE ACT A 524
25
CC7
SOFTWARE
SER A:109 , ALA A:112 , GLY A:113 , ALA A:116 , ALA A:117 , LYS A:120 , GLU A:390
BINDING SITE FOR RESIDUE ACT A 525
26
CC8
SOFTWARE
GLY A:176 , LEU A:177 , ALA A:178
BINDING SITE FOR RESIDUE ACT A 526
27
CC9
SOFTWARE
THR A:10 , THR A:201 , VAL A:204 , SER A:220 , HIS A:357 , ACT A:520
BINDING SITE FOR RESIDUE ACT A 527
28
DC3
SOFTWARE
ARG A:208 , ASP A:209 , SER B:311 , ASP B:312 , LYS B:313 , LEU B:314
BINDING SITE FOR RESIDUE ACT B 503
29
DC4
SOFTWARE
ASN A:215 , PRO A:365 , ARG A:367 , ASP B:310 , HOH B:734
BINDING SITE FOR RESIDUE ACT B 504
30
EC1
SOFTWARE
ASP A:310 , SER A:311 , ARG B:208 , ASN B:215
BINDING SITE FOR RESIDUE ACT B 510
31
EC2
SOFTWARE
ACT A:509 , ARG B:208 , ASP B:209
BINDING SITE FOR RESIDUE ACT B 511
32
EC6
SOFTWARE
ASP A:209 , HOH A:706 , GLN B:316 , GLY B:432
BINDING SITE FOR RESIDUE ACT B 515
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (167 KB)
Header - Asym.Unit
Biol.Unit 1 (83 KB)
Header - Biol.Unit 1
Biol.Unit 2 (81 KB)
Header - Biol.Unit 2
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