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4FUT
Asym. Unit
Info
Asym.Unit (186 KB)
Biol.Unit 1 (178 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ATP BOUND MATB FROM RHODOPSEUDOMONAS PALUSTRIS
Authors
:
K. C. Rank, H. A. Crosby, J. C. Escalante-Semerena, I. Rayment
Date
:
28 Jun 12 (Deposition) - 25 Jul 12 (Release) - 12 Sep 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Anl Superfamily, Methymalonyl-Coa Synthetase, Coa, Methylmalonate, Malonate, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. A. Crosby, K. C. Rank, I. Rayment, J. C. Escalante-Semerena
Structure-Guided Expansion Of The Substrate Range Of Methylmalonyl Coenzyme A Synthetase (Matb) Of Rhodopseudomonas Palustris.
Appl. Environ. Microbiol. V. 78 6619 2012
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Hetero Components
(4, 36)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: MAGNESIUM ION (MGa)
4a: N-DIMETHYL-LYSINE (MLYa)
4aa: N-DIMETHYL-LYSINE (MLYaa)
4ab: N-DIMETHYL-LYSINE (MLYab)
4b: N-DIMETHYL-LYSINE (MLYb)
4c: N-DIMETHYL-LYSINE (MLYc)
4d: N-DIMETHYL-LYSINE (MLYd)
4e: N-DIMETHYL-LYSINE (MLYe)
4f: N-DIMETHYL-LYSINE (MLYf)
4g: N-DIMETHYL-LYSINE (MLYg)
4h: N-DIMETHYL-LYSINE (MLYh)
4i: N-DIMETHYL-LYSINE (MLYi)
4j: N-DIMETHYL-LYSINE (MLYj)
4k: N-DIMETHYL-LYSINE (MLYk)
4l: N-DIMETHYL-LYSINE (MLYl)
4m: N-DIMETHYL-LYSINE (MLYm)
4n: N-DIMETHYL-LYSINE (MLYn)
4o: N-DIMETHYL-LYSINE (MLYo)
4p: N-DIMETHYL-LYSINE (MLYp)
4q: N-DIMETHYL-LYSINE (MLYq)
4r: N-DIMETHYL-LYSINE (MLYr)
4s: N-DIMETHYL-LYSINE (MLYs)
4t: N-DIMETHYL-LYSINE (MLYt)
4u: N-DIMETHYL-LYSINE (MLYu)
4v: N-DIMETHYL-LYSINE (MLYv)
4w: N-DIMETHYL-LYSINE (MLYw)
4x: N-DIMETHYL-LYSINE (MLYx)
4y: N-DIMETHYL-LYSINE (MLYy)
4z: N-DIMETHYL-LYSINE (MLYz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
1
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
GOL
6
Ligand/Ion
GLYCEROL
3
MG
1
Ligand/Ion
MAGNESIUM ION
4
MLY
28
Mod. Amino Acid
N-DIMETHYL-LYSINE
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:8 , HOH A:937 , HOH A:1103
BINDING SITE FOR RESIDUE GOL A 601
2
AC2
SOFTWARE
THR A:368 , PHE A:372 , HOH A:1306
BINDING SITE FOR RESIDUE GOL A 602
3
AC3
SOFTWARE
ALA A:282 , ARG A:286 , HOH A:1192
BINDING SITE FOR RESIDUE GOL A 603
4
AC4
SOFTWARE
ALA A:325 , LEU A:326 , GLY A:328 , VAL A:329 , HOH A:787 , HOH A:1018 , HOH A:1033 , HOH A:1299
BINDING SITE FOR RESIDUE GOL A 604
5
AC5
SOFTWARE
PRO A:204 , THR A:251 , ARG A:255 , THR A:485 , GLY A:487
BINDING SITE FOR RESIDUE GOL A 605
6
AC6
SOFTWARE
VAL A:52 , ARG A:152
BINDING SITE FOR RESIDUE GOL A 606
7
AC7
SOFTWARE
ATP A:608 , HOH A:775 , HOH A:802 , HOH A:1064 , HOH A:1065
BINDING SITE FOR RESIDUE MG A 607
8
AC8
SOFTWARE
THR A:163 , SER A:164 , GLY A:165 , THR A:166 , THR A:167 , HIS A:207 , SER A:277 , ALA A:278 , PRO A:279 , GLU A:298 , ARG A:299 , GLY A:301 , MET A:302 , THR A:303 , VAL A:322 , ASP A:382 , ILE A:394 , ARG A:397 , MG A:607 , HOH A:713 , HOH A:735 , HOH A:775 , HOH A:802 , HOH A:882 , HOH A:886 , HOH A:1065 , HOH A:1067 , HOH A:1168 , HOH A:1242
BINDING SITE FOR RESIDUE ATP A 608
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Sorry, no Info available
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4futa_ (A:)
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Protein Domains
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Organisms
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)
(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Acetyl-CoA synthetase-like
(64)
Superfamily
:
Acetyl-CoA synthetase-like
(64)
Family
:
automated matches
(26)
Protein domain
:
automated matches
(26)
Rhodopseudomonas palustris [TaxId: 258594]
(4)
1a
d4futa_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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