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4FPB
Biol. Unit 3
Info
Asym.Unit (297 KB)
Biol.Unit 1 (289 KB)
Biol.Unit 2 (148 KB)
Biol.Unit 3 (147 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN HEXOKINASE TYPE I WITH 1,5-ANHYDROGLUCITOL 6-PHOSPHATE
Authors
:
L. Shen, R. B. Honzatko
Date
:
21 Jun 12 (Deposition) - 03 Jul 13 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: B (1x)
Keywords
:
Hexokinase, 1, 5-Anhydroglucitol 6-Phosphate, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Shen, Y. Gao, R. B. Honzatko
Inhibitor Sites Of Unequal Affinity Linked By Binding Synergism In Mutant Forms Of Recombinant Human Hexokinase Type-I
To Be Published
[
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKa)
1b: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKb)
1c: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKc)
1d: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKd)
2a: BETA-D-GLUCOSE (BGCa)
2b: BETA-D-GLUCOSE (BGCb)
2c: BETA-D-GLUCOSE (BGCc)
2d: BETA-D-GLUCOSE (BGCd)
3a: CITRIC ACID (CITa)
3b: CITRIC ACID (CITb)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
4c: SODIUM ION (NAc)
4d: SODIUM ION (NAd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
0WK
2
Ligand/Ion
1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCITOL
2
BGC
2
Ligand/Ion
BETA-D-GLUCOSE
3
CIT
1
Ligand/Ion
CITRIC ACID
4
NA
-1
Ligand/Ion
SODIUM ION
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Sites
(7, 7)
Info
All Sites
1: AC8 (SOFTWARE)
2: AC9 (SOFTWARE)
3: BC1 (SOFTWARE)
4: BC2 (SOFTWARE)
5: BC3 (SOFTWARE)
6: BC4 (SOFTWARE)
7: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC8
SOFTWARE
SER B:155 , PHE B:156 , THR B:172 , LYS B:173 , ASN B:208 , ASP B:209 , THR B:210 , ILE B:229 , ASN B:235 , GLU B:260 , GLN B:291 , GLU B:294
BINDING SITE FOR RESIDUE BGC B 1001
2
AC9
SOFTWARE
ASP B:84 , GLY B:87 , SER B:88 , ASP B:209 , ILE B:229 , GLY B:231 , THR B:232 , GLY B:414 , SER B:415 , SER B:449
BINDING SITE FOR RESIDUE 0WK B 1002
3
BC1
SOFTWARE
SER B:603 , PHE B:604 , PRO B:605 , THR B:620 , LYS B:621 , ASN B:656 , ASP B:657 , THR B:658 , ILE B:677 , ASN B:683 , GLU B:708 , GLN B:739 , GLU B:742
BINDING SITE FOR RESIDUE BGC B 1003
4
BC2
SOFTWARE
ASP B:532 , GLY B:535 , THR B:536 , SER B:603 , ASP B:657 , GLY B:679 , THR B:680 , ASP B:861 , GLY B:862 , THR B:863 , GLY B:896 , SER B:897
BINDING SITE FOR RESIDUE 0WK B 1004
5
BC3
SOFTWARE
LEU B:242 , ILE B:245 , VAL B:248 , GLY B:250
BINDING SITE FOR RESIDUE NA B 1005
6
BC4
SOFTWARE
MET B:690 , VAL B:693 , VAL B:696 , GLY B:698
BINDING SITE FOR RESIDUE NA B 1006
7
BC5
SOFTWARE
GLN B:422 , ARG B:425 , ARG B:426
BINDING SITE FOR RESIDUE CIT B 1007
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d4fpba1 (A:16-222)
1b: SCOP_d4fpba2 (A:223-465)
1c: SCOP_d4fpba3 (A:466-670)
1d: SCOP_d4fpba4 (A:671-914)
1e: SCOP_d4fpbb1 (B:16-222)
1f: SCOP_d4fpbb2 (B:223-465)
1g: SCOP_d4fpbb3 (B:466-670)
1h: SCOP_d4fpbb4 (B:671-914)
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
Hexokinase
(19)
Protein domain
:
Mammalian type I hexokinase
(11)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d4fpba1
A:16-222
1b
d4fpba2
A:223-465
1c
d4fpba3
A:466-670
1d
d4fpba4
A:671-914
1e
d4fpbb1
B:16-222
1f
d4fpbb2
B:223-465
1g
d4fpbb3
B:466-670
1h
d4fpbb4
B:671-914
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CATH Domains
(0, 0)
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (297 KB)
Header - Asym.Unit
Biol.Unit 1 (289 KB)
Header - Biol.Unit 1
Biol.Unit 2 (148 KB)
Header - Biol.Unit 2
Biol.Unit 3 (147 KB)
Header - Biol.Unit 3
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