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4FPB
Asym. Unit
Info
Asym.Unit (297 KB)
Biol.Unit 1 (289 KB)
Biol.Unit 2 (148 KB)
Biol.Unit 3 (147 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RECOMBINANT HUMAN HEXOKINASE TYPE I WITH 1,5-ANHYDROGLUCITOL 6-PHOSPHATE
Authors
:
L. Shen, R. B. Honzatko
Date
:
21 Jun 12 (Deposition) - 03 Jul 13 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: B (1x)
Keywords
:
Hexokinase, 1, 5-Anhydroglucitol 6-Phosphate, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Shen, Y. Gao, R. B. Honzatko
Inhibitor Sites Of Unequal Affinity Linked By Binding Synergism In Mutant Forms Of Recombinant Human Hexokinase Type-I
To Be Published
[
close entry info
]
Hetero Components
(4, 14)
Info
All Hetero Components
1a: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKa)
1b: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKb)
1c: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKc)
1d: 1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCIT... (0WKd)
2a: BETA-D-GLUCOSE (BGCa)
2b: BETA-D-GLUCOSE (BGCb)
2c: BETA-D-GLUCOSE (BGCc)
2d: BETA-D-GLUCOSE (BGCd)
3a: CITRIC ACID (CITa)
3b: CITRIC ACID (CITb)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
4c: SODIUM ION (NAc)
4d: SODIUM ION (NAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
0WK
4
Ligand/Ion
1,5-ANHYDRO-6-O-PHOSPHONO-D-GLUCITOL
2
BGC
4
Ligand/Ion
BETA-D-GLUCOSE
3
CIT
2
Ligand/Ion
CITRIC ACID
4
NA
4
Ligand/Ion
SODIUM ION
[
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]
Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:155 , PHE A:156 , THR A:172 , LYS A:173 , ASN A:208 , ASP A:209 , THR A:210 , ILE A:229 , ASN A:235 , GLU A:260 , GLN A:291 , GLU A:294 , HOH A:1145
BINDING SITE FOR RESIDUE BGC A 1001
02
AC2
SOFTWARE
ASP A:84 , GLY A:87 , SER A:88 , THR A:153 , ASP A:209 , ILE A:229 , GLY A:231 , THR A:232 , ASP A:413 , GLY A:414 , SER A:415 , SER A:449
BINDING SITE FOR RESIDUE 0WK A 1002
03
AC3
SOFTWARE
SER A:603 , PHE A:604 , PRO A:605 , THR A:620 , LYS A:621 , ASN A:656 , ASP A:657 , THR A:658 , ILE A:677 , ASN A:683 , GLU A:708 , GLN A:739 , GLU A:742
BINDING SITE FOR RESIDUE BGC A 1003
04
AC4
SOFTWARE
ASP A:532 , GLY A:535 , THR A:536 , SER A:603 , ASP A:657 , GLY A:679 , THR A:680 , ASP A:861 , GLY A:862 , THR A:863 , GLY A:896 , SER A:897
BINDING SITE FOR RESIDUE 0WK A 1004
05
AC5
SOFTWARE
LEU A:242 , ILE A:245 , VAL A:248 , GLY A:250
BINDING SITE FOR RESIDUE NA A 1005
06
AC6
SOFTWARE
MET A:690 , VAL A:693 , VAL A:696 , GLY A:698
BINDING SITE FOR RESIDUE NA A 1006
07
AC7
SOFTWARE
PHE A:380 , ARG A:425 , ARG A:426 , LYS A:429 , HOH A:1182
BINDING SITE FOR RESIDUE CIT A 1007
08
AC8
SOFTWARE
SER B:155 , PHE B:156 , THR B:172 , LYS B:173 , ASN B:208 , ASP B:209 , THR B:210 , ILE B:229 , ASN B:235 , GLU B:260 , GLN B:291 , GLU B:294
BINDING SITE FOR RESIDUE BGC B 1001
09
AC9
SOFTWARE
ASP B:84 , GLY B:87 , SER B:88 , ASP B:209 , ILE B:229 , GLY B:231 , THR B:232 , GLY B:414 , SER B:415 , SER B:449
BINDING SITE FOR RESIDUE 0WK B 1002
10
BC1
SOFTWARE
SER B:603 , PHE B:604 , PRO B:605 , THR B:620 , LYS B:621 , ASN B:656 , ASP B:657 , THR B:658 , ILE B:677 , ASN B:683 , GLU B:708 , GLN B:739 , GLU B:742
BINDING SITE FOR RESIDUE BGC B 1003
11
BC2
SOFTWARE
ASP B:532 , GLY B:535 , THR B:536 , SER B:603 , ASP B:657 , GLY B:679 , THR B:680 , ASP B:861 , GLY B:862 , THR B:863 , GLY B:896 , SER B:897
BINDING SITE FOR RESIDUE 0WK B 1004
12
BC3
SOFTWARE
LEU B:242 , ILE B:245 , VAL B:248 , GLY B:250
BINDING SITE FOR RESIDUE NA B 1005
13
BC4
SOFTWARE
MET B:690 , VAL B:693 , VAL B:696 , GLY B:698
BINDING SITE FOR RESIDUE NA B 1006
14
BC5
SOFTWARE
GLN B:422 , ARG B:425 , ARG B:426
BINDING SITE FOR RESIDUE CIT B 1007
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d4fpba1 (A:16-222)
1b: SCOP_d4fpba2 (A:223-465)
1c: SCOP_d4fpba3 (A:466-670)
1d: SCOP_d4fpba4 (A:671-914)
1e: SCOP_d4fpbb1 (B:16-222)
1f: SCOP_d4fpbb2 (B:223-465)
1g: SCOP_d4fpbb3 (B:466-670)
1h: SCOP_d4fpbb4 (B:671-914)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
Hexokinase
(19)
Protein domain
:
Mammalian type I hexokinase
(11)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d4fpba1
A:16-222
1b
d4fpba2
A:223-465
1c
d4fpba3
A:466-670
1d
d4fpba4
A:671-914
1e
d4fpbb1
B:16-222
1f
d4fpbb2
B:223-465
1g
d4fpbb3
B:466-670
1h
d4fpbb4
B:671-914
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (297 KB)
Header - Asym.Unit
Biol.Unit 1 (289 KB)
Header - Biol.Unit 1
Biol.Unit 2 (148 KB)
Header - Biol.Unit 2
Biol.Unit 3 (147 KB)
Header - Biol.Unit 3
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