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4FM4
Asym. Unit
Info
Asym.Unit (1.1 MB)
Biol.Unit 1 (144 KB)
Biol.Unit 2 (143 KB)
Biol.Unit 3 (143 KB)
Biol.Unit 4 (143 KB)
Biol.Unit 5 (144 KB)
Biol.Unit 6 (145 KB)
Biol.Unit 7 (143 KB)
Biol.Unit 8 (143 KB)
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(1)
Title
:
WILD TYPE FE-TYPE NITRILE HYDRATASE FROM COMAMONAS TESTOSTERONI NI1
Authors
:
M. L. Kuhn, S. Martinez, N. Gumataotao, U. Bornscheuer, D. Liu, R. C. Hol
Date
:
15 Jun 12 (Deposition) - 22 Aug 12 (Release) - 22 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.38
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K,L (1x)
Biol. Unit 7: M,N (1x)
Biol. Unit 8: O,P (1x)
Keywords
:
Iron Type Hydratase, Hydrolysis, Sulfinic Acid, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. L. Kuhn, S. Martinez, N. Gumataotao, U. Bornscheuer, D. Liu, R. C. Holz
The Fe-Type Nitrile Hydratase From Comamonas Testosteroni Ni1 Does Not Require An Activator Accessory Protein For Expression In Escherichia Coli.
Biochem. Biophys. Res. Commun. V. 424 365 2012
[
close entry info
]
Hetero Components
(3, 32)
Info
All Hetero Components
1a: 3-SULFINOALANINE (CSDa)
1b: 3-SULFINOALANINE (CSDb)
1c: 3-SULFINOALANINE (CSDc)
1d: 3-SULFINOALANINE (CSDd)
1e: 3-SULFINOALANINE (CSDe)
1f: 3-SULFINOALANINE (CSDf)
1g: 3-SULFINOALANINE (CSDg)
1h: 3-SULFINOALANINE (CSDh)
1i: 3-SULFINOALANINE (CSDi)
1j: 3-SULFINOALANINE (CSDj)
1k: 3-SULFINOALANINE (CSDk)
1l: 3-SULFINOALANINE (CSDl)
1m: 3-SULFINOALANINE (CSDm)
1n: 3-SULFINOALANINE (CSDn)
1o: 3-SULFINOALANINE (CSDo)
1p: 3-SULFINOALANINE (CSDp)
2a: FE (III) ION (FEa)
2b: FE (III) ION (FEb)
2c: FE (III) ION (FEc)
2d: FE (III) ION (FEd)
2e: FE (III) ION (FEe)
2f: FE (III) ION (FEf)
2g: FE (III) ION (FEg)
2h: FE (III) ION (FEh)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
3c: PHOSPHATE ION (PO4c)
3d: PHOSPHATE ION (PO4d)
3e: PHOSPHATE ION (PO4e)
3f: PHOSPHATE ION (PO4f)
3g: PHOSPHATE ION (PO4g)
3h: PHOSPHATE ION (PO4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CSD
16
Mod. Amino Acid
3-SULFINOALANINE
2
FE
8
Ligand/Ion
FE (III) ION
3
PO4
8
Ligand/Ion
PHOSPHATE ION
[
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:80 , HIS A:81 , CSD A:104 , THR A:105 , PHE A:107 , ARG A:157
BINDING SITE FOR RESIDUE PO4 A 301
02
AC2
SOFTWARE
CYS A:99 , CSD A:102 , SER A:103 , CSD A:104
BINDING SITE FOR RESIDUE FE A 302
03
AC3
SOFTWARE
HIS C:80 , HIS C:81 , CSD C:104 , THR C:105 , PHE C:107 , ARG C:157 , HOH C:487
BINDING SITE FOR RESIDUE PO4 C 301
04
AC4
SOFTWARE
CYS C:99 , CSD C:102 , SER C:103 , CSD C:104
BINDING SITE FOR RESIDUE FE C 302
05
AC5
SOFTWARE
HIS E:80 , HIS E:81 , SER E:103 , CSD E:104 , THR E:105 , PHE E:107 , ARG E:157
BINDING SITE FOR RESIDUE PO4 E 301
06
AC6
SOFTWARE
CYS E:99 , CSD E:102 , SER E:103 , CSD E:104
BINDING SITE FOR RESIDUE FE E 302
07
AC7
SOFTWARE
HIS G:80 , HIS G:81 , SER G:103 , CSD G:104 , THR G:105 , PHE G:107 , ARG G:157
BINDING SITE FOR RESIDUE PO4 G 301
08
AC8
SOFTWARE
CYS G:99 , CSD G:102 , SER G:103 , CSD G:104
BINDING SITE FOR RESIDUE FE G 302
09
AC9
SOFTWARE
HIS I:80 , HIS I:81 , SER I:103 , CSD I:104 , THR I:105 , PHE I:107 , ARG I:157
BINDING SITE FOR RESIDUE PO4 I 301
10
BC1
SOFTWARE
CYS I:99 , CSD I:102 , SER I:103 , CSD I:104
BINDING SITE FOR RESIDUE FE I 302
11
BC2
SOFTWARE
HIS K:80 , HIS K:81 , CSD K:104 , THR K:105 , PHE K:107 , ARG K:157 , HOH K:465
BINDING SITE FOR RESIDUE PO4 K 301
12
BC3
SOFTWARE
CYS K:99 , CSD K:102 , SER K:103 , CSD K:104
BINDING SITE FOR RESIDUE FE K 302
13
BC4
SOFTWARE
HIS M:80 , HIS M:81 , CSD M:104 , THR M:105 , PHE M:107 , ARG M:157
BINDING SITE FOR RESIDUE PO4 M 301
14
BC5
SOFTWARE
CYS M:99 , CSD M:102 , SER M:103 , CSD M:104
BINDING SITE FOR RESIDUE FE M 302
15
BC6
SOFTWARE
HIS O:80 , HIS O:81 , CSD O:104 , THR O:105 , PHE O:107 , ARG O:157
BINDING SITE FOR RESIDUE PO4 O 301
16
BC7
SOFTWARE
CYS O:99 , CSD O:102 , SER O:103 , CSD O:104
BINDING SITE FOR RESIDUE FE O 302
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d4fm4b_ (B:)
1b: SCOP_d4fm4d_ (D:)
1c: SCOP_d4fm4f_ (F:)
1d: SCOP_d4fm4h_ (H:)
1e: SCOP_d4fm4j_ (J:)
1f: SCOP_d4fm4l_ (L:)
1g: SCOP_d4fm4n_ (N:)
1h: SCOP_d4fm4p_ (P:)
2a: SCOP_d4fm4a_ (A:)
2b: SCOP_d4fm4c_ (C:)
2c: SCOP_d4fm4e_ (E:)
2d: SCOP_d4fm4g_ (G:)
2e: SCOP_d4fm4i_ (I:)
2f: SCOP_d4fm4k_ (K:)
2g: SCOP_d4fm4m_ (M:)
2h: SCOP_d4fm4o_ (O:)
View:
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)
(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
Electron transport accessory proteins
(58)
Family
:
automated matches
(6)
Protein domain
:
automated matches
(6)
Comamonas testosteroni [TaxId: 285]
(1)
1a
d4fm4b_
B:
1b
d4fm4d_
D:
1c
d4fm4f_
F:
1d
d4fm4h_
H:
1e
d4fm4j_
J:
1f
d4fm4l_
L:
1g
d4fm4n_
N:
1h
d4fm4p_
P:
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitrile hydratase alpha chain
(36)
Superfamily
:
Nitrile hydratase alpha chain
(36)
Family
:
automated matches
(1)
Protein domain
:
automated matches
(1)
Comamonas testosteroni [TaxId: 285]
(1)
2a
d4fm4a_
A:
2b
d4fm4c_
C:
2c
d4fm4e_
E:
2d
d4fm4g_
G:
2e
d4fm4i_
I:
2f
d4fm4k_
K:
2g
d4fm4m_
M:
2h
d4fm4o_
O:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain B
Chain C
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Chain E
Chain F
Chain G
Chain H
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Chain J
Chain K
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Chain M
Chain N
Chain O
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (1.1 MB)
Header - Asym.Unit
Biol.Unit 1 (144 KB)
Header - Biol.Unit 1
Biol.Unit 2 (143 KB)
Header - Biol.Unit 2
Biol.Unit 3 (143 KB)
Header - Biol.Unit 3
Biol.Unit 4 (143 KB)
Header - Biol.Unit 4
Biol.Unit 5 (144 KB)
Header - Biol.Unit 5
Biol.Unit 6 (145 KB)
Header - Biol.Unit 6
Biol.Unit 7 (143 KB)
Header - Biol.Unit 7
Biol.Unit 8 (143 KB)
Header - Biol.Unit 8
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