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4FK5
Asym. Unit
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Asym.Unit (260 KB)
Biol.Unit 1 (253 KB)
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(1)
Title
:
STRUCTURE OF THE SAGA UBP8(S144N)/SGF11/SUS1/SGF73 DUB MODULE
Authors
:
N. L. Samara, A. E. Ringel, C. Wolberger
Date
:
12 Jun 12 (Deposition) - 25 Jul 12 (Release) - 29 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A,B,C,E
Biol. Unit 1: A,B,C,E (1x)
Keywords
:
Multi-Protein Complex, Deubiquitination, Transcription, Nucleosome, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
N. L. Samara, A. E. Ringel, C. Wolberger
A Role For Intersubunit Interactions In Maintaining Saga Deubiquitinating Module Structure And Activity.
Structure V. 20 1414 2012
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
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No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
GOL
2
Ligand/Ion
GLYCEROL
3
ZN
8
Ligand/Ion
ZINC ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:4 , HIS A:6 , CYS A:96 , CYS A:99
BINDING SITE FOR RESIDUE ZN A 501
02
AC2
SOFTWARE
CYS A:46 , CYS A:49 , CYS A:68 , HIS A:73
BINDING SITE FOR RESIDUE ZN A 502
03
AC3
SOFTWARE
CYS A:60 , CYS A:63 , HIS A:77 , HIS A:83
BINDING SITE FOR RESIDUE ZN A 503
04
AC4
SOFTWARE
HIS A:170 , CYS A:174 , CYS A:182 , CYS A:185
BINDING SITE FOR RESIDUE ZN A 504
05
AC5
SOFTWARE
HIS A:250 , CYS A:271 , CYS A:273 , HIS A:276
BINDING SITE FOR RESIDUE ZN A 505
06
AC6
SOFTWARE
CYS A:289 , CYS A:292 , CYS A:336 , CYS A:339
BINDING SITE FOR RESIDUE ZN A 506
07
AC7
SOFTWARE
ASN A:387 , ASN A:390 , HOH A:608 , HOH A:839 , HOH A:841 , GLN B:35
BINDING SITE FOR RESIDUE GOL A 507
08
AC8
SOFTWARE
ASN A:25 , ALA A:26 , HOH A:760
BINDING SITE FOR RESIDUE EDO A 508
09
AC9
SOFTWARE
CYS C:73 , CYS C:76 , HIS C:88 , CYS C:92
BINDING SITE FOR RESIDUE ZN C 101
10
BC1
SOFTWARE
GLY A:104 , THR C:33 , GLN C:34 , LEU C:37 , HOH C:245 , LYS E:71 , HOH E:253
BINDING SITE FOR RESIDUE GOL C 102
11
BC2
SOFTWARE
CYS E:78 , CYS E:81 , HIS E:93
BINDING SITE FOR RESIDUE ZN E 101
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Exons
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SCOP Domains
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