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4FJ1
Biol. Unit 1
Info
Asym.Unit (353 KB)
Biol.Unit 1 (175 KB)
Biol.Unit 2 (174 KB)
Biol.Unit 3 (345 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE TERNARY COMPLEX BETWEEN A FUNGAL 17BETA-HYDROXYSTEROID DEHYDROGENASE (HOLO FORM) AND GENISTEIN
Authors
:
A. Cassetta, D. Lamba, I. Krastanova
Date
:
11 Jun 12 (Deposition) - 03 Jul 13 (Release) - 29 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Short Chain Dehydrogenase/Reductase, Rossmann Fold, Oxidoreductase, Nadp(H), Oxidoreductase-Oxidoreductase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
A. Cassetta, D. Lamba, I. Krastanova, K. Kristan, M. Brunskole-Svegelj, J. Stojan, T. Lanisnik-Rizner
Crystallographic Studies On The Flavonoid Inhibition Of A Fungal 17Beta-Hydroxysteroid Dehydrogenase
To Be Published
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: DIMETHYL SULFOXIDE (DMSa)
1b: DIMETHYL SULFOXIDE (DMSb)
1c: DIMETHYL SULFOXIDE (DMSc)
1d: DIMETHYL SULFOXIDE (DMSd)
1e: DIMETHYL SULFOXIDE (DMSe)
1f: DIMETHYL SULFOXIDE (DMSf)
1g: DIMETHYL SULFOXIDE (DMSg)
1h: DIMETHYL SULFOXIDE (DMSh)
1i: DIMETHYL SULFOXIDE (DMSi)
1j: DIMETHYL SULFOXIDE (DMSj)
1k: DIMETHYL SULFOXIDE (DMSk)
1l: DIMETHYL SULFOXIDE (DMSl)
2a: GENISTEIN (GENa)
2b: GENISTEIN (GENb)
3a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
3d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
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Label:
No.
Name
Count
Type
Full Name
1
DMS
5
Ligand/Ion
DIMETHYL SULFOXIDE
2
GEN
1
Ligand/Ion
GENISTEIN
3
NAP
2
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:25 , ARG A:28 , GLY A:29 , ILE A:30 , TYR A:49 , ALA A:50 , ASN A:51 , SER A:52 , ASP A:76 , ILE A:77 , ARG A:78 , ASN A:103 , SER A:104 , GLY A:105 , LEU A:126 , THR A:151 , SER A:152 , TYR A:167 , LYS A:171 , PRO A:197 , GLY A:198 , GLY A:199 , THR A:200 , THR A:202 , ASP A:203 , MET A:204 , HOH A:409 , HOH A:424 , HOH A:435 , HOH A:469
BINDING SITE FOR RESIDUE NAP A 301
2
AC2
SOFTWARE
ASN A:154 , PHE A:159 , GLY A:198 , GLY A:199
BINDING SITE FOR RESIDUE DMS A 302
3
AC3
SOFTWARE
HIS A:211 , TYR A:212 , ILE A:213
BINDING SITE FOR RESIDUE DMS A 303
4
AC4
SOFTWARE
LYS A:74 , ALA A:75 , GLU A:82 , LYS A:85 , GLN A:89
BINDING SITE FOR RESIDUE DMS A 304
5
AC5
SOFTWARE
GLY B:25 , ARG B:28 , GLY B:29 , ILE B:30 , TYR B:49 , ALA B:50 , ASN B:51 , SER B:52 , ASP B:76 , ILE B:77 , ARG B:78 , ASN B:103 , SER B:104 , GLY B:105 , LEU B:126 , THR B:151 , SER B:152 , SER B:153 , TYR B:167 , LYS B:171 , PRO B:197 , GLY B:198 , GLY B:199 , THR B:200 , THR B:202 , MET B:204 , GEN B:302 , HOH B:414 , HOH B:427 , HOH B:450 , HOH B:458
BINDING SITE FOR RESIDUE NAP B 301
6
AC6
SOFTWARE
PHE B:159 , GLY B:199 , MET B:204 , PHE B:205 , VAL B:208 , SER B:209 , TYR B:212 , ILE B:213 , MET B:227 , ALA B:228 , NAP B:301 , DMS B:303 , HOH B:476 , HOH B:480
BINDING SITE FOR RESIDUE GEN B 302
7
AC7
SOFTWARE
ASN B:154 , GLY B:198 , GLY B:199 , GEN B:302
BINDING SITE FOR RESIDUE DMS B 303
8
AC8
SOFTWARE
GLY B:14 , GLU B:254 , HOH B:473 , PRO D:13
BINDING SITE FOR RESIDUE DMS B 304
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4fj1a_ (A:)
1b: SCOP_d4fj1b_ (B:)
1c: SCOP_d4fj1c_ (C:)
1d: SCOP_d4fj1d_ (D:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
automated matches
(447)
Protein domain
:
automated matches
(447)
Cochliobolus lunatus [TaxId: 5503]
(9)
1a
d4fj1a_
A:
1b
d4fj1b_
B:
1c
d4fj1c_
C:
1d
d4fj1d_
D:
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (353 KB)
Header - Asym.Unit
Biol.Unit 1 (175 KB)
Header - Biol.Unit 1
Biol.Unit 2 (174 KB)
Header - Biol.Unit 2
Biol.Unit 3 (345 KB)
Header - Biol.Unit 3
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