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4FIL
Biol. Unit 1
Info
Asym.Unit (191 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (50 KB)
Biol.Unit 3 (50 KB)
Biol.Unit 4 (51 KB)
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(1)
Title
:
STRUCTURE OF FHUD2 FROM STAPHYLOCOCCUS AUREUS WITH BOUND FERRIOXAMINE B
Authors
:
L. K. Briere, D. E. Heinrichs, B. H. Shilton
Date
:
08 Jun 12 (Deposition) - 12 Jun 13 (Release) - 04 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Class Iii Solute Binding Protein, Primary Binding Site For Iron- Hydroxamate Siderophores, Fhucbg, Extracellular, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. J. Podkowa, L. A. Briere, D. E. Heinrichs, B. H. Shilton
Crystal And Solution Structure Analysis Of Fhud2 From Staphylococcus Aureus In Multiple Unliganded Conformations And Bound To Ferrioxamine-B.
Biochemistry V. 53 2017 2014
[
close entry info
]
Hetero Components
(2, 6)
Info
All Hetero Components
1a: FERRIOXAMINE B (0UEa)
1b: FERRIOXAMINE B (0UEb)
1c: FERRIOXAMINE B (0UEc)
1d: FERRIOXAMINE B (0UEd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
3a: ZINC ION (ZNa)
3aa: ZINC ION (ZNaa)
3ab: ZINC ION (ZNab)
3ac: ZINC ION (ZNac)
3ad: ZINC ION (ZNad)
3ae: ZINC ION (ZNae)
3af: ZINC ION (ZNaf)
3ag: ZINC ION (ZNag)
3ah: ZINC ION (ZNah)
3ai: ZINC ION (ZNai)
3aj: ZINC ION (ZNaj)
3ak: ZINC ION (ZNak)
3al: ZINC ION (ZNal)
3am: ZINC ION (ZNam)
3an: ZINC ION (ZNan)
3ao: ZINC ION (ZNao)
3ap: ZINC ION (ZNap)
3aq: ZINC ION (ZNaq)
3ar: ZINC ION (ZNar)
3as: ZINC ION (ZNas)
3at: ZINC ION (ZNat)
3au: ZINC ION (ZNau)
3av: ZINC ION (ZNav)
3aw: ZINC ION (ZNaw)
3ax: ZINC ION (ZNax)
3ay: ZINC ION (ZNay)
3az: ZINC ION (ZNaz)
3b: ZINC ION (ZNb)
3ba: ZINC ION (ZNba)
3bb: ZINC ION (ZNbb)
3bc: ZINC ION (ZNbc)
3bd: ZINC ION (ZNbd)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
3j: ZINC ION (ZNj)
3k: ZINC ION (ZNk)
3l: ZINC ION (ZNl)
3m: ZINC ION (ZNm)
3n: ZINC ION (ZNn)
3o: ZINC ION (ZNo)
3p: ZINC ION (ZNp)
3q: ZINC ION (ZNq)
3r: ZINC ION (ZNr)
3s: ZINC ION (ZNs)
3t: ZINC ION (ZNt)
3u: ZINC ION (ZNu)
3v: ZINC ION (ZNv)
3w: ZINC ION (ZNw)
3x: ZINC ION (ZNx)
3y: ZINC ION (ZNy)
3z: ZINC ION (ZNz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
0UE
1
Ligand/Ion
FERRIOXAMINE B
2
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
3
ZN
-1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: DC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:56 , GLN A:74 , TYR A:110 , THR A:112 , TYR A:130 , ASP A:184 , PHE A:186 , TYR A:191 , TYR A:193 , TRP A:197 , ARG A:199 , TRP A:225 , TRP A:279 , TYR A:280 , ASN A:281 , HOH A:516 , ZN B:409
BINDING SITE FOR RESIDUE 0UE A 401
02
AC2
SOFTWARE
ASP A:195 , HOH A:505
BINDING SITE FOR RESIDUE ZN A 402
03
AC3
SOFTWARE
ASP A:93 , ASP A:113 , HOH A:531
BINDING SITE FOR RESIDUE ZN A 403
04
AC4
SOFTWARE
ASP A:129
BINDING SITE FOR RESIDUE ZN A 404
05
AC5
SOFTWARE
GLU A:149
BINDING SITE FOR RESIDUE ZN A 405
06
AC6
SOFTWARE
GLU A:185 , LYS B:188
BINDING SITE FOR RESIDUE ZN A 406
07
AC7
SOFTWARE
LYS A:263 , GLU A:267
BINDING SITE FOR RESIDUE ZN A 407
08
AC8
SOFTWARE
ASP A:187 , GLU B:185
BINDING SITE FOR RESIDUE ZN A 408
09
AC9
SOFTWARE
VAL A:128 , ASP A:129 , HIS A:133 , HOH A:532 , HOH A:600
BINDING SITE FOR RESIDUE ZN A 409
10
BC1
SOFTWARE
GLU A:169 , EDO A:419 , GLU C:169
BINDING SITE FOR RESIDUE ZN A 410
11
BC2
SOFTWARE
GLY A:92 , ASP A:95 , HOH A:591
BINDING SITE FOR RESIDUE ZN A 411
12
BC3
SOFTWARE
GLU A:246 , LYS A:296 , HOH A:567
BINDING SITE FOR RESIDUE ZN A 412
13
BC4
SOFTWARE
ASP A:105
BINDING SITE FOR RESIDUE ZN A 413
14
BC5
SOFTWARE
GLU A:140
BINDING SITE FOR RESIDUE ZN A 414
15
BC6
SOFTWARE
ASP A:177
BINDING SITE FOR RESIDUE ZN A 415
16
BC7
SOFTWARE
ASN A:196 , GLY A:224
BINDING SITE FOR RESIDUE EDO A 416
17
BC8
SOFTWARE
LYS A:82 , LYS C:82 , ASP C:83
BINDING SITE FOR RESIDUE EDO A 417
18
BC9
SOFTWARE
ARG A:290 , LYS A:294 , EDO A:419 , LYS C:291 , GLU C:295
BINDING SITE FOR RESIDUE EDO A 418
19
CC1
SOFTWARE
THR A:162 , ASP A:166 , ARG A:290 , LYS A:294 , ZN A:410 , EDO A:418 , EDO A:420 , HOH A:521
BINDING SITE FOR RESIDUE EDO A 419
20
CC2
SOFTWARE
LYS A:165 , EDO A:419
BINDING SITE FOR RESIDUE EDO A 420
21
DC2
SOFTWARE
0UE A:401 , HOH A:545 , ASP B:187
BINDING SITE FOR RESIDUE ZN B 409
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
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Pfam Domains
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all PFAM domains
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Protein & NOT Site
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Chain A
Asymmetric Unit 1
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
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Asym.Unit (191 KB)
Header - Asym.Unit
Biol.Unit 1 (50 KB)
Header - Biol.Unit 1
Biol.Unit 2 (50 KB)
Header - Biol.Unit 2
Biol.Unit 3 (50 KB)
Header - Biol.Unit 3
Biol.Unit 4 (51 KB)
Header - Biol.Unit 4
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