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4FIL
Asym. Unit
Info
Asym.Unit (191 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (50 KB)
Biol.Unit 3 (50 KB)
Biol.Unit 4 (51 KB)
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(1)
Title
:
STRUCTURE OF FHUD2 FROM STAPHYLOCOCCUS AUREUS WITH BOUND FERRIOXAMINE B
Authors
:
L. K. Briere, D. E. Heinrichs, B. H. Shilton
Date
:
08 Jun 12 (Deposition) - 12 Jun 13 (Release) - 04 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Class Iii Solute Binding Protein, Primary Binding Site For Iron- Hydroxamate Siderophores, Fhucbg, Extracellular, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. J. Podkowa, L. A. Briere, D. E. Heinrichs, B. H. Shilton
Crystal And Solution Structure Analysis Of Fhud2 From Staphylococcus Aureus In Multiple Unliganded Conformations And Bound To Ferrioxamine-B.
Biochemistry V. 53 2017 2014
[
close entry info
]
Hetero Components
(3, 72)
Info
All Hetero Components
1a: FERRIOXAMINE B (0UEa)
1b: FERRIOXAMINE B (0UEb)
1c: FERRIOXAMINE B (0UEc)
1d: FERRIOXAMINE B (0UEd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
3a: ZINC ION (ZNa)
3aa: ZINC ION (ZNaa)
3ab: ZINC ION (ZNab)
3ac: ZINC ION (ZNac)
3ad: ZINC ION (ZNad)
3ae: ZINC ION (ZNae)
3af: ZINC ION (ZNaf)
3ag: ZINC ION (ZNag)
3ah: ZINC ION (ZNah)
3ai: ZINC ION (ZNai)
3aj: ZINC ION (ZNaj)
3ak: ZINC ION (ZNak)
3al: ZINC ION (ZNal)
3am: ZINC ION (ZNam)
3an: ZINC ION (ZNan)
3ao: ZINC ION (ZNao)
3ap: ZINC ION (ZNap)
3aq: ZINC ION (ZNaq)
3ar: ZINC ION (ZNar)
3as: ZINC ION (ZNas)
3at: ZINC ION (ZNat)
3au: ZINC ION (ZNau)
3av: ZINC ION (ZNav)
3aw: ZINC ION (ZNaw)
3ax: ZINC ION (ZNax)
3ay: ZINC ION (ZNay)
3az: ZINC ION (ZNaz)
3b: ZINC ION (ZNb)
3ba: ZINC ION (ZNba)
3bb: ZINC ION (ZNbb)
3bc: ZINC ION (ZNbc)
3bd: ZINC ION (ZNbd)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
3j: ZINC ION (ZNj)
3k: ZINC ION (ZNk)
3l: ZINC ION (ZNl)
3m: ZINC ION (ZNm)
3n: ZINC ION (ZNn)
3o: ZINC ION (ZNo)
3p: ZINC ION (ZNp)
3q: ZINC ION (ZNq)
3r: ZINC ION (ZNr)
3s: ZINC ION (ZNs)
3t: ZINC ION (ZNt)
3u: ZINC ION (ZNu)
3v: ZINC ION (ZNv)
3w: ZINC ION (ZNw)
3x: ZINC ION (ZNx)
3y: ZINC ION (ZNy)
3z: ZINC ION (ZNz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
0UE
4
Ligand/Ion
FERRIOXAMINE B
2
EDO
12
Ligand/Ion
1,2-ETHANEDIOL
3
ZN
56
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(72, 72)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:56 , GLN A:74 , TYR A:110 , THR A:112 , TYR A:130 , ASP A:184 , PHE A:186 , TYR A:191 , TYR A:193 , TRP A:197 , ARG A:199 , TRP A:225 , TRP A:279 , TYR A:280 , ASN A:281 , HOH A:516 , ZN B:409
BINDING SITE FOR RESIDUE 0UE A 401
02
AC2
SOFTWARE
ASP A:195 , HOH A:505
BINDING SITE FOR RESIDUE ZN A 402
03
AC3
SOFTWARE
ASP A:93 , ASP A:113 , HOH A:531
BINDING SITE FOR RESIDUE ZN A 403
04
AC4
SOFTWARE
ASP A:129
BINDING SITE FOR RESIDUE ZN A 404
05
AC5
SOFTWARE
GLU A:149
BINDING SITE FOR RESIDUE ZN A 405
06
AC6
SOFTWARE
GLU A:185 , LYS B:188
BINDING SITE FOR RESIDUE ZN A 406
07
AC7
SOFTWARE
LYS A:263 , GLU A:267
BINDING SITE FOR RESIDUE ZN A 407
08
AC8
SOFTWARE
ASP A:187 , GLU B:185
BINDING SITE FOR RESIDUE ZN A 408
09
AC9
SOFTWARE
VAL A:128 , ASP A:129 , HIS A:133 , HOH A:532 , HOH A:600
BINDING SITE FOR RESIDUE ZN A 409
10
BC1
SOFTWARE
GLU A:169 , EDO A:419 , GLU C:169
BINDING SITE FOR RESIDUE ZN A 410
11
BC2
SOFTWARE
GLY A:92 , ASP A:95 , HOH A:591
BINDING SITE FOR RESIDUE ZN A 411
12
BC3
SOFTWARE
GLU A:246 , LYS A:296 , HOH A:567
BINDING SITE FOR RESIDUE ZN A 412
13
BC4
SOFTWARE
ASP A:105
BINDING SITE FOR RESIDUE ZN A 413
14
BC5
SOFTWARE
GLU A:140
BINDING SITE FOR RESIDUE ZN A 414
15
BC6
SOFTWARE
ASP A:177
BINDING SITE FOR RESIDUE ZN A 415
16
BC7
SOFTWARE
ASN A:196 , GLY A:224
BINDING SITE FOR RESIDUE EDO A 416
17
BC8
SOFTWARE
LYS A:82 , LYS C:82 , ASP C:83
BINDING SITE FOR RESIDUE EDO A 417
18
BC9
SOFTWARE
ARG A:290 , LYS A:294 , EDO A:419 , LYS C:291 , GLU C:295
BINDING SITE FOR RESIDUE EDO A 418
19
CC1
SOFTWARE
THR A:162 , ASP A:166 , ARG A:290 , LYS A:294 , ZN A:410 , EDO A:418 , EDO A:420 , HOH A:521
BINDING SITE FOR RESIDUE EDO A 419
20
CC2
SOFTWARE
LYS A:165 , EDO A:419
BINDING SITE FOR RESIDUE EDO A 420
21
CC3
SOFTWARE
THR B:56 , GLN B:74 , TYR B:110 , THR B:112 , TYR B:130 , PHE B:186 , TYR B:193 , TRP B:197 , ARG B:199 , TRP B:225 , TRP B:279 , TYR B:280 , HOH B:517 , HOH B:583 , HOH B:599 , HOH B:624
BINDING SITE FOR RESIDUE 0UE B 401
22
CC4
SOFTWARE
ASP B:195 , HOH B:518 , HOH B:574 , HOH B:595
BINDING SITE FOR RESIDUE ZN B 402
23
CC5
SOFTWARE
ASP B:129 , HOH B:567 , HOH B:600
BINDING SITE FOR RESIDUE ZN B 403
24
CC6
SOFTWARE
GLU B:246 , ASP B:274 , ASP B:292 , LYS B:296 , HOH B:569 , HOH B:598
BINDING SITE FOR RESIDUE ZN B 404
25
CC7
SOFTWARE
ASP B:239 , LYS B:263 , HIS B:269 , HOH B:529
BINDING SITE FOR RESIDUE ZN B 405
26
CC8
SOFTWARE
ASP B:93 , ASP B:113 , HOH B:524 , HOH B:525 , HOH B:591
BINDING SITE FOR RESIDUE ZN B 406
27
CC9
SOFTWARE
ASP B:158
BINDING SITE FOR RESIDUE ZN B 407
28
DC1
SOFTWARE
ASP B:105 , GLU C:149 , HOH C:573
BINDING SITE FOR RESIDUE ZN B 408
29
DC2
SOFTWARE
0UE A:401 , HOH A:545 , ASP B:187
BINDING SITE FOR RESIDUE ZN B 409
30
DC3
SOFTWARE
HIS B:133 , GLN B:138 , MET B:141 , HOH B:566
BINDING SITE FOR RESIDUE ZN B 410
31
DC4
SOFTWARE
LYS B:302 , HOH B:537
BINDING SITE FOR RESIDUE ZN B 411
32
DC5
SOFTWARE
GLU B:267 , HOH B:593 , HOH B:633
BINDING SITE FOR RESIDUE ZN B 412
33
DC6
SOFTWARE
ASP B:95 , LYS B:98
BINDING SITE FOR RESIDUE ZN B 413
34
DC7
SOFTWARE
GLU B:140 , LYS B:156
BINDING SITE FOR RESIDUE ZN B 414
35
DC8
SOFTWARE
LYS B:291
BINDING SITE FOR RESIDUE ZN B 415
36
DC9
SOFTWARE
ASP B:287 , ARG B:290
BINDING SITE FOR RESIDUE ZN B 416
37
EC1
SOFTWARE
ASP B:239 , HOH B:580 , HOH B:634
BINDING SITE FOR RESIDUE ZN B 417
38
EC2
SOFTWARE
ASP B:195 , ASN B:196 , GLY B:224 , HOH B:622
BINDING SITE FOR RESIDUE EDO B 418
39
EC3
SOFTWARE
LYS B:151 , TRP B:155
BINDING SITE FOR RESIDUE EDO B 419
40
EC4
SOFTWARE
GLU B:97 , LYS B:98
BINDING SITE FOR RESIDUE EDO B 420
41
EC5
SOFTWARE
THR C:56 , GLN C:74 , TYR C:110 , THR C:112 , TYR C:130 , PHE C:186 , TYR C:191 , TYR C:193 , TRP C:197 , ARG C:199 , TRP C:225 , TRP C:279 , TYR C:280 , HOH C:514 , HOH C:543
BINDING SITE FOR RESIDUE 0UE C 401
42
EC6
SOFTWARE
ASP C:195 , HOH C:506 , HOH C:578
BINDING SITE FOR RESIDUE ZN C 402
43
EC7
SOFTWARE
GLU B:149 , ASP C:105
BINDING SITE FOR RESIDUE ZN C 403
44
EC8
SOFTWARE
ASP C:129 , HOH C:534
BINDING SITE FOR RESIDUE ZN C 404
45
EC9
SOFTWARE
GLU C:185
BINDING SITE FOR RESIDUE ZN C 405
46
FC1
SOFTWARE
GLU C:246 , LYS C:296
BINDING SITE FOR RESIDUE ZN C 406
47
FC2
SOFTWARE
HOH C:521 , HOH C:566 , HOH C:591
BINDING SITE FOR RESIDUE ZN C 407
48
FC3
SOFTWARE
VAL C:128 , ASP C:129 , HIS C:133 , HOH C:529
BINDING SITE FOR RESIDUE ZN C 408
49
FC4
SOFTWARE
ASP C:177
BINDING SITE FOR RESIDUE ZN C 409
50
FC5
SOFTWARE
ASP C:95 , HOH C:574 , HOH C:605
BINDING SITE FOR RESIDUE ZN C 410
51
FC6
SOFTWARE
GLU C:102
BINDING SITE FOR RESIDUE ZN C 411
52
FC7
SOFTWARE
ASP C:115 , HOH C:539
BINDING SITE FOR RESIDUE ZN C 412
53
FC8
SOFTWARE
ASP C:93 , ASP C:113 , HOH C:503
BINDING SITE FOR RESIDUE ZN C 413
54
FC9
SOFTWARE
THR D:56 , TYR D:110 , THR D:112 , TYR D:130 , PHE D:186 , TYR D:191 , TYR D:193 , TRP D:197 , ARG D:199 , TRP D:225 , TRP D:279 , TYR D:280 , HOH D:514 , HOH D:545 , HOH D:556 , HOH D:581
BINDING SITE FOR RESIDUE 0UE D 401
55
GC1
SOFTWARE
ASP D:129
BINDING SITE FOR RESIDUE ZN D 402
56
GC2
SOFTWARE
GLU D:185 , HOH D:575
BINDING SITE FOR RESIDUE ZN D 403
57
GC3
SOFTWARE
GLU D:246 , LYS D:296 , HOH D:626
BINDING SITE FOR RESIDUE ZN D 404
58
GC4
SOFTWARE
GLU D:169 , HOH D:544 , HOH D:623
BINDING SITE FOR RESIDUE ZN D 405
59
GC5
SOFTWARE
ASP D:158 , HOH D:598
BINDING SITE FOR RESIDUE ZN D 406
60
GC6
SOFTWARE
ASP D:195 , HOH D:506 , HOH D:515
BINDING SITE FOR RESIDUE ZN D 407
61
GC7
SOFTWARE
ASP D:239 , GLU D:267 , HIS D:269 , HOH D:594 , HOH D:624
BINDING SITE FOR RESIDUE ZN D 408
62
GC8
SOFTWARE
VAL D:128 , ASP D:129 , HIS D:133 , HOH D:526
BINDING SITE FOR RESIDUE ZN D 409
63
GC9
SOFTWARE
GLU D:161 , HOH D:591 , HOH D:613
BINDING SITE FOR RESIDUE ZN D 410
64
HC1
SOFTWARE
ARG D:49 , ASP D:105
BINDING SITE FOR RESIDUE ZN D 411
65
HC2
SOFTWARE
ASP D:187 , HOH D:582
BINDING SITE FOR RESIDUE ZN D 412
66
HC3
SOFTWARE
GLY D:92 , ASP D:95 , LYS D:98
BINDING SITE FOR RESIDUE ZN D 413
67
HC4
SOFTWARE
ASP D:93 , ASP D:113 , HOH D:523 , HOH D:525 , HOH D:527
BINDING SITE FOR RESIDUE ZN D 414
68
HC5
SOFTWARE
GLU C:97 , GLU D:267 , HOH D:550 , HOH D:608
BINDING SITE FOR RESIDUE ZN D 415
69
HC6
SOFTWARE
LYS D:165
BINDING SITE FOR RESIDUE EDO D 416
70
HC7
SOFTWARE
LYS D:172
BINDING SITE FOR RESIDUE EDO D 417
71
HC8
SOFTWARE
GLY D:224
BINDING SITE FOR RESIDUE EDO D 418
72
HC9
SOFTWARE
LYS D:63 , LYS D:151 , TRP D:155
BINDING SITE FOR RESIDUE EDO D 419
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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[
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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