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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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4FED
Asym. Unit
Info
Asym.Unit (395 KB)
Biol.Unit 1 (382 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HTT36Q3H
Authors
:
M. Kim
Date
:
30 May 12 (Deposition) - 13 Mar 13 (Release) - 14 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.81
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Alpha Helix, Loop, Beta-Strand Hairpin, Beta Strand Hairpin, Disease Protein, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Kim
Beta Conformation Of Polyglutamine Track Revealed By A Crystal Structure Of Huntingtin N-Terminal Region With Insertion Of Three Histidine Residues.
Prion V. 7 221 2013
[
close entry info
]
Hetero Components
(2, 36)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: ZINC ION (ZNa)
2aa: ZINC ION (ZNaa)
2ab: ZINC ION (ZNab)
2ac: ZINC ION (ZNac)
2ad: ZINC ION (ZNad)
2ae: ZINC ION (ZNae)
2af: ZINC ION (ZNaf)
2ag: ZINC ION (ZNag)
2ah: ZINC ION (ZNah)
2ai: ZINC ION (ZNai)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
2g: ZINC ION (ZNg)
2h: ZINC ION (ZNh)
2i: ZINC ION (ZNi)
2j: ZINC ION (ZNj)
2k: ZINC ION (ZNk)
2l: ZINC ION (ZNl)
2m: ZINC ION (ZNm)
2n: ZINC ION (ZNn)
2o: ZINC ION (ZNo)
2p: ZINC ION (ZNp)
2q: ZINC ION (ZNq)
2r: ZINC ION (ZNr)
2s: ZINC ION (ZNs)
2t: ZINC ION (ZNt)
2u: ZINC ION (ZNu)
2v: ZINC ION (ZNv)
2w: ZINC ION (ZNw)
2x: ZINC ION (ZNx)
2y: ZINC ION (ZNy)
2z: ZINC ION (ZNz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
ZN
35
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(34, 34)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:65
BINDING SITE FOR RESIDUE ZN A 501
02
AC2
SOFTWARE
HIS A:203 , CA A:509 , HOH A:605
BINDING SITE FOR RESIDUE ZN A 502
03
AC3
SOFTWARE
GLU A:310 , ZN A:504 , HOH A:607 , HOH C:601
BINDING SITE FOR RESIDUE ZN A 503
04
AC4
SOFTWARE
GLU A:310 , ZN A:503
BINDING SITE FOR RESIDUE ZN A 504
05
AC5
SOFTWARE
LYS A:1
BINDING SITE FOR RESIDUE ZN A 506
06
AC6
SOFTWARE
HIS A:39
BINDING SITE FOR RESIDUE ZN A 507
07
AC7
SOFTWARE
PHE A:92 , GLU A:172
BINDING SITE FOR RESIDUE ZN A 508
08
AC8
SOFTWARE
PRO A:133 , ZN A:502
BINDING SITE FOR RESIDUE CA A 509
09
AC9
SOFTWARE
GLU B:291 , ASP C:287 , GLU C:310 , HOH C:612
BINDING SITE FOR RESIDUE ZN B 501
10
BC1
SOFTWARE
ASP B:209
BINDING SITE FOR RESIDUE ZN B 502
11
BC2
SOFTWARE
HIS A:397 , ASP B:65
BINDING SITE FOR RESIDUE ZN B 503
12
BC3
SOFTWARE
GLU B:38
BINDING SITE FOR RESIDUE ZN B 504
13
BC4
SOFTWARE
ASP B:82
BINDING SITE FOR RESIDUE ZN B 505
14
BC5
SOFTWARE
GLU B:328 , HOH B:608
BINDING SITE FOR RESIDUE ZN B 506
15
BC6
SOFTWARE
TRP B:158 , GLU B:328 , HOH B:606
BINDING SITE FOR RESIDUE ZN B 508
16
BC7
SOFTWARE
ARG A:344 , HIS B:395 , GLN B:396
BINDING SITE FOR RESIDUE ZN B 509
17
BC8
SOFTWARE
ZN B:512
BINDING SITE FOR RESIDUE ZN B 510
18
BC9
SOFTWARE
HIS B:203 , HOH B:612
BINDING SITE FOR RESIDUE ZN B 511
19
CC1
SOFTWARE
GLU A:278 , GLU B:172 , ZN B:510 , HOH B:607
BINDING SITE FOR RESIDUE ZN B 512
20
CC2
SOFTWARE
LYS B:170 , ZN B:514
BINDING SITE FOR RESIDUE ZN B 513
21
CC3
SOFTWARE
ASP A:82 , LYS B:170 , ASP B:180 , ZN B:513
BINDING SITE FOR RESIDUE ZN B 514
22
CC4
SOFTWARE
LYS B:26 , ASP B:30 , LYS C:26 , ASP C:30 , ZN C:510 , ZN C:511
BINDING SITE FOR RESIDUE ZN C 501
23
CC5
SOFTWARE
HIS C:203
BINDING SITE FOR RESIDUE ZN C 502
24
CC6
SOFTWARE
ASP C:65 , GLN C:398
BINDING SITE FOR RESIDUE ZN C 503
25
CC7
SOFTWARE
ASP A:209 , SER C:211
BINDING SITE FOR RESIDUE ZN C 504
26
CC8
SOFTWARE
HIS C:39
BINDING SITE FOR RESIDUE ZN C 505
27
CC9
SOFTWARE
GLU C:328
BINDING SITE FOR RESIDUE ZN C 506
28
DC1
SOFTWARE
ASP B:287 , GLU B:310 , GLU C:291 , HOH C:612
BINDING SITE FOR RESIDUE ZN C 507
29
DC2
SOFTWARE
LYS B:26 , GLU B:288 , LYS C:26 , GLU C:288 , ZN C:510 , ZN C:511
BINDING SITE FOR RESIDUE ZN C 508
30
DC3
SOFTWARE
GLU C:38
BINDING SITE FOR RESIDUE ZN C 509
31
DC4
SOFTWARE
LYS B:26 , ZN C:501 , ZN C:508
BINDING SITE FOR RESIDUE ZN C 510
32
DC5
SOFTWARE
LYS B:26 , LYS C:26 , ZN C:501 , ZN C:508
BINDING SITE FOR RESIDUE ZN C 511
33
DC6
SOFTWARE
SER A:211 , GLN B:402 , ASP C:209 , SER C:211 , ILE C:212
BINDING SITE FOR RESIDUE ZN C 512
34
DC7
SOFTWARE
GLU C:153 , HIS C:395 , GLN C:401
BINDING SITE FOR RESIDUE ZN C 513
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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Atom Selection
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Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Chain C
Asymmetric Unit 1
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Example Commands
Example Command
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
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Asym.Unit (395 KB)
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Header - Biol.Unit 1
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