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4F8E
Asym. Unit
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Asym.Unit (200 KB)
Biol.Unit 1 (578 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN PRS1 D52H MUTANT
Authors
:
P. Chen, M. Teng, X. Li
Date
:
17 May 12 (Deposition) - 22 May 13 (Release) - 12 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.27
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (3x)
Keywords
:
Prpp Synthesis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Chen, J. Li, J. Ma, M. Teng, X. Li
A Small Disturbance, But A Serious Disease: The Possible Mechanism Of D52H-Mutant Of Human Prs1 That Causes Gout
Iubmb Life V. 65 518 2013
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
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No.
Name
Count
Type
Full Name
1
MG
2
Ligand/Ion
MAGNESIUM ION
2
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:224 , THR A:225 , CYS A:226 , GLY A:227 , THR A:228 , HOH A:516
BINDING SITE FOR RESIDUE SO4 A 401
2
AC2
SOFTWARE
SER A:47 , ARG A:49 , SER A:308 , VAL A:309 , SER A:310 , HOH A:511 , HOH A:529 , ARG B:104
BINDING SITE FOR RESIDUE SO4 A 402
3
AC3
SOFTWARE
SER A:132 , GLN A:135 , ASN A:144 , TYR A:146 , HOH A:501 , LYS B:100 , ASP B:101 , LYS B:102
BINDING SITE FOR RESIDUE SO4 A 403
4
AC4
SOFTWARE
HIS A:52 , TYR A:54
BINDING SITE FOR RESIDUE MG A 404
5
AC5
SOFTWARE
ASP B:224 , THR B:225 , CYS B:226 , GLY B:227 , THR B:228
BINDING SITE FOR RESIDUE SO4 B 1001
6
AC6
SOFTWARE
ARG A:104 , SER B:47 , ARG B:49 , SER B:308 , VAL B:309 , SER B:310 , HOH B:1121
BINDING SITE FOR RESIDUE SO4 B 1002
7
AC7
SOFTWARE
ASP A:101 , LYS A:102 , SER B:132 , GLN B:135 , ASN B:144 , TYR B:146 , HOH B:1103
BINDING SITE FOR RESIDUE SO4 B 1003
8
AC8
SOFTWARE
HIS B:52 , TYR B:54
BINDING SITE FOR RESIDUE MG B 1004
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4f8ea1 (A:2-160)
1b: SCOP_d4f8ea2 (A:161-316)
1c: SCOP_d4f8eb1 (B:3-160)
1d: SCOP_d4f8eb2 (B:161-317)
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Protein Domains
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(
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Organisms
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
automated matches
(39)
Protein domain
:
automated matches
(39)
Human (Homo sapiens) [TaxId: 9606]
(9)
1a
d4f8ea1
A:2-160
1b
d4f8ea2
A:161-316
1c
d4f8eb1
B:3-160
1d
d4f8eb2
B:161-317
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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