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4EV5
Biol. Unit 3
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Asym.Unit (1.4 MB)
Biol.Unit 1 (469 KB)
Biol.Unit 2 (469 KB)
Biol.Unit 3 (470 KB)
Biol.Unit 4, α-C (1.4 MB)
Biol.Unit 4 (1.4 MB)
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(1)
Title
:
CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE-1 FROM HANSENULA POLYMORPHA IN COMPLEX WITH BENZYLAMINE
Authors
:
V. J. Klema, C. J. Solheid, C. M. Wilmot
Date
:
25 Apr 12 (Deposition) - 13 Mar 13 (Release) - 13 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: A,B,C,D,E,F (1x)
Keywords
:
Peroxisome, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. J. Klema, C. J. Solheid, J. P. Klinman, C. M. Wilmot
Crystal Structure Of Copper Amine Oxidase-1 From Hansenula Polymorpha In Complex With Benzylamine
To Be Published
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close entry info
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: BENZYLAMINE (ABNa)
1b: BENZYLAMINE (ABNb)
1c: BENZYLAMINE (ABNc)
1d: BENZYLAMINE (ABNd)
1e: BENZYLAMINE (ABNe)
1f: BENZYLAMINE (ABNf)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
2e: COPPER (II) ION (CUe)
2f: COPPER (II) ION (CUf)
3a: GLYCEROL (GOLa)
3aa: GLYCEROL (GOLaa)
3ab: GLYCEROL (GOLab)
3ac: GLYCEROL (GOLac)
3ad: GLYCEROL (GOLad)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
3h: GLYCEROL (GOLh)
3i: GLYCEROL (GOLi)
3j: GLYCEROL (GOLj)
3k: GLYCEROL (GOLk)
3l: GLYCEROL (GOLl)
3m: GLYCEROL (GOLm)
3n: GLYCEROL (GOLn)
3o: GLYCEROL (GOLo)
3p: GLYCEROL (GOLp)
3q: GLYCEROL (GOLq)
3r: GLYCEROL (GOLr)
3s: GLYCEROL (GOLs)
3t: GLYCEROL (GOLt)
3u: GLYCEROL (GOLu)
3v: GLYCEROL (GOLv)
3w: GLYCEROL (GOLw)
3x: GLYCEROL (GOLx)
3y: GLYCEROL (GOLy)
3z: GLYCEROL (GOLz)
4a: HYDROGEN PEROXIDE (PEOa)
4b: HYDROGEN PEROXIDE (PEOb)
4c: HYDROGEN PEROXIDE (PEOc)
4d: HYDROGEN PEROXIDE (PEOd)
5a: 3-AMINO-6-HYDROXY-TYROSINE (TYQa)
5b: 3-AMINO-6-HYDROXY-TYROSINE (TYQb)
5c: 3-AMINO-6-HYDROXY-TYROSINE (TYQc)
5d: 3-AMINO-6-HYDROXY-TYROSINE (TYQd)
5e: 3-AMINO-6-HYDROXY-TYROSINE (TYQe)
5f: 3-AMINO-6-HYDROXY-TYROSINE (TYQf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ABN
2
Ligand/Ion
BENZYLAMINE
2
CU
-1
Ligand/Ion
COPPER (II) ION
3
GOL
9
Ligand/Ion
GLYCEROL
4
PEO
2
Ligand/Ion
HYDROGEN PEROXIDE
5
TYQ
2
Mod. Amino Acid
3-AMINO-6-HYDROXY-TYROSINE
[
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Sites
(17, 17)
Info
All Sites
01: AC9 (SOFTWARE)
02: BC6 (SOFTWARE)
03: DC5 (SOFTWARE)
04: DC6 (SOFTWARE)
05: DC7 (SOFTWARE)
06: DC8 (SOFTWARE)
07: DC9 (SOFTWARE)
08: EC1 (SOFTWARE)
09: EC2 (SOFTWARE)
10: EC3 (SOFTWARE)
11: EC4 (SOFTWARE)
12: EC5 (SOFTWARE)
13: EC6 (SOFTWARE)
14: EC7 (SOFTWARE)
15: EC8 (SOFTWARE)
16: EC9 (SOFTWARE)
17: FC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC9
SOFTWARE
LEU B:558 , LYS B:561 , SER B:591 , HOH B:1267 , LYS F:561 , ASP F:593 , HOH F:819
BINDING SITE FOR RESIDUE GOL B 701
02
BC6
SOFTWARE
TYR A:534 , HIS B:218 , LYS B:219 , TYR B:448 , HOH B:1376 , GLU E:69
BINDING SITE FOR RESIDUE GOL B 707
03
DC5
SOFTWARE
HIS E:456 , HIS E:458 , HIS E:624 , PEO E:705
BINDING SITE FOR RESIDUE CU E 701
04
DC6
SOFTWARE
GLU E:368 , LYS E:393 , TYR E:410 , ASP E:422 , ARG E:424 , HOH E:934
BINDING SITE FOR RESIDUE GOL E 702
05
DC7
SOFTWARE
TYR E:499 , HOH E:974 , HOH E:1037
BINDING SITE FOR RESIDUE GOL E 703
06
DC8
SOFTWARE
HIS E:23 , TYR E:64 , LYS E:68 , LYS E:265 , PHE E:266 , ASP E:280 , HOH E:931
BINDING SITE FOR RESIDUE GOL E 704
07
DC9
SOFTWARE
TYQ E:405 , HIS E:456 , HIS E:458 , MET E:634 , CU E:701 , HOH E:1048
BINDING SITE FOR RESIDUE PEO E 705
08
EC1
SOFTWARE
GLU E:58 , PRO E:59 , ARG E:463 , TYR E:575 , ASN E:578 , HOH E:925 , HOH E:954
BINDING SITE FOR RESIDUE GOL E 706
09
EC2
SOFTWARE
TRP E:156 , ALA E:317 , ASP E:319 , TYR E:323 , ALA E:402 , ALA E:403 , TYQ E:405 , HOH E:1258
BINDING SITE FOR RESIDUE ABN E 707
10
EC3
SOFTWARE
HIS F:456 , HIS F:458 , HIS F:624 , PEO F:707
BINDING SITE FOR RESIDUE CU F 701
11
EC4
SOFTWARE
HIS F:23 , TYR F:64 , LYS F:68 , VAL F:258 , LYS F:265 , ASP F:280
BINDING SITE FOR RESIDUE GOL F 702
12
EC5
SOFTWARE
GLU F:58 , HIS F:294 , ARG F:463 , TYR F:575 , ASN F:578 , HOH F:921 , HOH F:982 , HOH F:1045
BINDING SITE FOR RESIDUE GOL F 703
13
EC6
SOFTWARE
GLY E:371 , GLU F:368 , LYS F:393 , TYR F:410 , ASP F:422 , ARG F:424 , HOH F:1256
BINDING SITE FOR RESIDUE GOL F 704
14
EC7
SOFTWARE
ARG F:213 , LYS F:214 , VAL F:215 , ASP F:436 , ASN F:450 , HOH F:1218 , HOH F:1299
BINDING SITE FOR RESIDUE GOL F 705
15
EC8
SOFTWARE
PRO F:484 , HOH F:1096
BINDING SITE FOR RESIDUE GOL F 706
16
EC9
SOFTWARE
TYQ F:405 , HIS F:456 , HIS F:458 , MET F:634 , CU F:701 , HOH F:1122
BINDING SITE FOR RESIDUE PEO F 707
17
FC1
SOFTWARE
LEU F:121 , TRP F:156 , ALA F:317 , ASP F:319 , TYR F:323 , ALA F:402 , ALA F:403 , TYQ F:405 , HOH F:1003
BINDING SITE FOR RESIDUE ABN F 708
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Sorry, no Info available
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (1.4 MB)
Header - Asym.Unit
Biol.Unit 1 (469 KB)
Header - Biol.Unit 1
Biol.Unit 2 (469 KB)
Header - Biol.Unit 2
Biol.Unit 3 (470 KB)
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