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Asym.Unit (1.4 MB)
Biol.Unit 1 (469 KB)
Biol.Unit 2 (469 KB)
Biol.Unit 3 (470 KB)
Biol.Unit 4, α-C (1.4 MB)
Biol.Unit 4 (1.4 MB)
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(1)
Title
:
CRYSTAL STRUCTURE OF COPPER AMINE OXIDASE-1 FROM HANSENULA POLYMORPHA IN COMPLEX WITH BENZYLAMINE
Authors
:
V. J. Klema, C. J. Solheid, C. M. Wilmot
Date
:
25 Apr 12 (Deposition) - 13 Mar 13 (Release) - 13 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: A,B,C,D,E,F (1x)
Keywords
:
Peroxisome, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. J. Klema, C. J. Solheid, J. P. Klinman, C. M. Wilmot
Crystal Structure Of Copper Amine Oxidase-1 From Hansenula Polymorpha In Complex With Benzylamine
To Be Published
[
close entry info
]
Hetero Components
(5, 52)
Info
All Hetero Components
1a: BENZYLAMINE (ABNa)
1b: BENZYLAMINE (ABNb)
1c: BENZYLAMINE (ABNc)
1d: BENZYLAMINE (ABNd)
1e: BENZYLAMINE (ABNe)
1f: BENZYLAMINE (ABNf)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
2e: COPPER (II) ION (CUe)
2f: COPPER (II) ION (CUf)
3a: GLYCEROL (GOLa)
3aa: GLYCEROL (GOLaa)
3ab: GLYCEROL (GOLab)
3ac: GLYCEROL (GOLac)
3ad: GLYCEROL (GOLad)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
3h: GLYCEROL (GOLh)
3i: GLYCEROL (GOLi)
3j: GLYCEROL (GOLj)
3k: GLYCEROL (GOLk)
3l: GLYCEROL (GOLl)
3m: GLYCEROL (GOLm)
3n: GLYCEROL (GOLn)
3o: GLYCEROL (GOLo)
3p: GLYCEROL (GOLp)
3q: GLYCEROL (GOLq)
3r: GLYCEROL (GOLr)
3s: GLYCEROL (GOLs)
3t: GLYCEROL (GOLt)
3u: GLYCEROL (GOLu)
3v: GLYCEROL (GOLv)
3w: GLYCEROL (GOLw)
3x: GLYCEROL (GOLx)
3y: GLYCEROL (GOLy)
3z: GLYCEROL (GOLz)
4a: HYDROGEN PEROXIDE (PEOa)
4b: HYDROGEN PEROXIDE (PEOb)
4c: HYDROGEN PEROXIDE (PEOc)
4d: HYDROGEN PEROXIDE (PEOd)
5a: 3-AMINO-6-HYDROXY-TYROSINE (TYQa)
5b: 3-AMINO-6-HYDROXY-TYROSINE (TYQb)
5c: 3-AMINO-6-HYDROXY-TYROSINE (TYQc)
5d: 3-AMINO-6-HYDROXY-TYROSINE (TYQd)
5e: 3-AMINO-6-HYDROXY-TYROSINE (TYQe)
5f: 3-AMINO-6-HYDROXY-TYROSINE (TYQf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ABN
6
Ligand/Ion
BENZYLAMINE
2
CU
6
Ligand/Ion
COPPER (II) ION
3
GOL
30
Ligand/Ion
GLYCEROL
4
PEO
4
Ligand/Ion
HYDROGEN PEROXIDE
5
TYQ
6
Mod. Amino Acid
3-AMINO-6-HYDROXY-TYROSINE
[
close Hetero Component info
]
Sites
(46, 46)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:561 , ASP A:593 , TYR C:160 , LYS C:561 , SER C:591 , HOH C:1011
BINDING SITE FOR RESIDUE GOL A 701
02
AC2
SOFTWARE
HIS A:456 , HIS A:458 , HIS A:624 , PEO A:707
BINDING SITE FOR RESIDUE CU A 702
03
AC3
SOFTWARE
HIS A:23 , TYR A:64 , LYS A:68 , LYS A:265 , HIS A:267 , ASP A:280 , HOH A:936
BINDING SITE FOR RESIDUE GOL A 703
04
AC4
SOFTWARE
HIS A:218 , LYS A:219
BINDING SITE FOR RESIDUE GOL A 704
05
AC5
SOFTWARE
GLU A:368 , LYS A:393 , ASP A:422 , ARG A:424
BINDING SITE FOR RESIDUE GOL A 705
06
AC6
SOFTWARE
PRO A:484 , TYR A:499 , HOH A:1191 , HOH A:1278
BINDING SITE FOR RESIDUE GOL A 706
07
AC7
SOFTWARE
TYQ A:405 , LEU A:429 , HIS A:456 , HIS A:458 , MET A:634 , CU A:702 , HOH A:1323
BINDING SITE FOR RESIDUE PEO A 707
08
AC8
SOFTWARE
TRP A:156 , ALA A:317 , ASP A:319 , TYR A:323 , ALA A:402 , ALA A:403 , TYQ A:405 , HOH A:1324
BINDING SITE FOR RESIDUE ABN A 708
09
AC9
SOFTWARE
LEU B:558 , LYS B:561 , SER B:591 , HOH B:1267 , LYS F:561 , ASP F:593 , HOH F:819
BINDING SITE FOR RESIDUE GOL B 701
10
BC1
SOFTWARE
HIS B:456 , HIS B:458 , HIS B:624 , PEO B:708
BINDING SITE FOR RESIDUE CU B 702
11
BC2
SOFTWARE
GLU B:368 , LYS B:393 , TYR B:410 , ASP B:422 , ARG B:424 , HOH B:1232
BINDING SITE FOR RESIDUE GOL B 703
12
BC3
SOFTWARE
HIS B:23 , TYR B:64 , LYS B:68 , LYS B:265 , ASP B:280 , HOH B:1054
BINDING SITE FOR RESIDUE GOL B 704
13
BC4
SOFTWARE
TYR B:499
BINDING SITE FOR RESIDUE GOL B 705
14
BC5
SOFTWARE
ARG B:213 , LYS B:214 , VAL B:215 , ASP B:436 , HOH B:1292 , HOH B:1351
BINDING SITE FOR RESIDUE GOL B 706
15
BC6
SOFTWARE
TYR A:534 , HIS B:218 , LYS B:219 , TYR B:448 , HOH B:1376 , GLU E:69
BINDING SITE FOR RESIDUE GOL B 707
16
BC7
SOFTWARE
TYQ B:405 , HIS B:456 , HIS B:458 , HIS B:624 , MET B:634 , CU B:702 , HOH B:837
BINDING SITE FOR RESIDUE PEO B 708
17
BC8
SOFTWARE
LEU B:121 , TRP B:156 , ALA B:317 , ASP B:319 , TYR B:323 , ALA B:402 , ALA B:403 , TYQ B:405 , HOH B:1295
BINDING SITE FOR RESIDUE ABN B 709
18
BC9
SOFTWARE
HIS C:456 , HIS C:458 , HIS C:624 , HOH C:1235 , HOH C:1295
BINDING SITE FOR RESIDUE CU C 701
19
CC1
SOFTWARE
HIS C:23 , TYR C:64 , VAL C:258 , LYS C:265 , HIS C:267 , ASP C:280 , HOH C:1288
BINDING SITE FOR RESIDUE GOL C 702
20
CC2
SOFTWARE
LYS C:393 , TYR C:410 , ARG C:420 , ASP C:422 , ARG C:424 , HOH C:1152
BINDING SITE FOR RESIDUE GOL C 703
21
CC3
SOFTWARE
LYS C:214 , VAL C:215 , ASP C:436 , HOH C:982
BINDING SITE FOR RESIDUE GOL C 704
22
CC4
SOFTWARE
PRO C:144 , TYR C:177 , SER C:216
BINDING SITE FOR RESIDUE GOL C 705
23
CC5
SOFTWARE
TYR C:499 , TRP D:443
BINDING SITE FOR RESIDUE GOL C 706
24
CC6
SOFTWARE
PRO C:550 , LEU C:551 , SER C:567 , HOH C:919 , HOH D:1087
BINDING SITE FOR RESIDUE GOL C 707
25
CC7
SOFTWARE
LEU C:121 , TRP C:156 , ALA C:317 , ASP C:319 , TYR C:323 , ALA C:402 , ALA C:403 , TYQ C:405
BINDING SITE FOR RESIDUE ABN C 708
26
CC8
SOFTWARE
HIS D:456 , HIS D:458 , HIS D:624 , HOH D:1257
BINDING SITE FOR RESIDUE CU D 701
27
CC9
SOFTWARE
HIS D:23 , TYR D:64 , LYS D:68 , LYS D:265 , HIS D:267 , ASP D:280
BINDING SITE FOR RESIDUE GOL D 702
28
DC1
SOFTWARE
LEU D:512 , ASN D:514 , GLU D:516 , ARG D:521 , HOH D:1237
BINDING SITE FOR RESIDUE GOL D 703
29
DC2
SOFTWARE
TYR D:499 , HOH D:1167
BINDING SITE FOR RESIDUE GOL D 704
30
DC3
SOFTWARE
ILE D:342 , HIS D:343
BINDING SITE FOR RESIDUE GOL D 705
31
DC4
SOFTWARE
PRO D:155 , TRP D:156 , ALA D:317 , ASP D:319 , TYR D:323 , ALA D:402 , ALA D:403 , TYQ D:405 , HOH D:1199
BINDING SITE FOR RESIDUE ABN D 706
32
DC5
SOFTWARE
HIS E:456 , HIS E:458 , HIS E:624 , PEO E:705
BINDING SITE FOR RESIDUE CU E 701
33
DC6
SOFTWARE
GLU E:368 , LYS E:393 , TYR E:410 , ASP E:422 , ARG E:424 , HOH E:934
BINDING SITE FOR RESIDUE GOL E 702
34
DC7
SOFTWARE
TYR E:499 , HOH E:974 , HOH E:1037
BINDING SITE FOR RESIDUE GOL E 703
35
DC8
SOFTWARE
HIS E:23 , TYR E:64 , LYS E:68 , LYS E:265 , PHE E:266 , ASP E:280 , HOH E:931
BINDING SITE FOR RESIDUE GOL E 704
36
DC9
SOFTWARE
TYQ E:405 , HIS E:456 , HIS E:458 , MET E:634 , CU E:701 , HOH E:1048
BINDING SITE FOR RESIDUE PEO E 705
37
EC1
SOFTWARE
GLU E:58 , PRO E:59 , ARG E:463 , TYR E:575 , ASN E:578 , HOH E:925 , HOH E:954
BINDING SITE FOR RESIDUE GOL E 706
38
EC2
SOFTWARE
TRP E:156 , ALA E:317 , ASP E:319 , TYR E:323 , ALA E:402 , ALA E:403 , TYQ E:405 , HOH E:1258
BINDING SITE FOR RESIDUE ABN E 707
39
EC3
SOFTWARE
HIS F:456 , HIS F:458 , HIS F:624 , PEO F:707
BINDING SITE FOR RESIDUE CU F 701
40
EC4
SOFTWARE
HIS F:23 , TYR F:64 , LYS F:68 , VAL F:258 , LYS F:265 , ASP F:280
BINDING SITE FOR RESIDUE GOL F 702
41
EC5
SOFTWARE
GLU F:58 , HIS F:294 , ARG F:463 , TYR F:575 , ASN F:578 , HOH F:921 , HOH F:982 , HOH F:1045
BINDING SITE FOR RESIDUE GOL F 703
42
EC6
SOFTWARE
GLY E:371 , GLU F:368 , LYS F:393 , TYR F:410 , ASP F:422 , ARG F:424 , HOH F:1256
BINDING SITE FOR RESIDUE GOL F 704
43
EC7
SOFTWARE
ARG F:213 , LYS F:214 , VAL F:215 , ASP F:436 , ASN F:450 , HOH F:1218 , HOH F:1299
BINDING SITE FOR RESIDUE GOL F 705
44
EC8
SOFTWARE
PRO F:484 , HOH F:1096
BINDING SITE FOR RESIDUE GOL F 706
45
EC9
SOFTWARE
TYQ F:405 , HIS F:456 , HIS F:458 , MET F:634 , CU F:701 , HOH F:1122
BINDING SITE FOR RESIDUE PEO F 707
46
FC1
SOFTWARE
LEU F:121 , TRP F:156 , ALA F:317 , ASP F:319 , TYR F:323 , ALA F:402 , ALA F:403 , TYQ F:405 , HOH F:1003
BINDING SITE FOR RESIDUE ABN F 708
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Sorry, no Info available
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Asym.Unit (1.4 MB)
Header - Asym.Unit
Biol.Unit 1 (469 KB)
Header - Biol.Unit 1
Biol.Unit 2 (469 KB)
Header - Biol.Unit 2
Biol.Unit 3 (470 KB)
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