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4EHP
Asym. Unit
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Asym.Unit (63 KB)
Biol.Unit 1 (58 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN VINCULIN HEAD DOMAIN (RESIDUES 1-252) IN COMPLEX WITH ALPHA-CATENIN (RESIDUES 277-382)
Authors
:
T. Izard, E. S. Rangarajan
Date
:
03 Apr 12 (Deposition) - 18 Apr 12 (Release) - 17 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.66
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Adherens Junctions, Vinculin Binding Site, Vinculin Binding Domain, Helix Bundle, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. S. Rangarajan, T. Izard
Alpha-Catenin Unfurls Upon Binding To Vinculin
J. Biol. Chem. V. 287 18492 2012
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Hetero Components
(1, 9)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
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No.
Name
Count
Type
Full Name
1
ACT
9
Ligand/Ion
ACETATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:6 , ILE A:9 , ASP A:127 , HOH A:447 , ARG B:330
BINDING SITE FOR RESIDUE ACT A 301
2
AC2
SOFTWARE
ASP A:39 , LEU A:250 , THR A:251 , SER A:252
BINDING SITE FOR RESIDUE ACT A 302
3
AC3
SOFTWARE
ILE A:245 , GLN A:249 , HOH A:454
BINDING SITE FOR RESIDUE ACT A 303
4
AC4
SOFTWARE
SER A:207 , LYS A:228 , ASN A:229
BINDING SITE FOR RESIDUE ACT A 304
5
AC5
SOFTWARE
VAL A:32 , LYS A:35 , TYR A:100 , SER A:101 , ARG A:105 , TYR B:351
BINDING SITE FOR RESIDUE ACT A 305
6
AC6
SOFTWARE
THR A:197 , GLU A:200
BINDING SITE FOR RESIDUE ACT A 306
7
AC7
SOFTWARE
THR A:65 , PHE A:126 , LYS A:133 , ARG B:329
BINDING SITE FOR RESIDUE ACT A 307
8
AC8
SOFTWARE
LYS A:87 , ASP A:110
BINDING SITE FOR RESIDUE ACT A 308
9
AC9
SOFTWARE
PRO A:2 , GLN A:90 , TYR A:107 , THR A:183 , GLN A:185 , GLU A:186
BINDING SITE FOR RESIDUE ACT A 309
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4ehpa1 (A:2-128)
1b: SCOP_d4ehpa2 (A:129-252)
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Class
:
All alpha proteins
(14657)
Fold
:
Four-helical up-and-down bundle
(308)
Superfamily
:
alpha-catenin/vinculin-like
(25)
Family
:
alpha-catenin/vinculin
(24)
Protein domain
:
Vinculin
(12)
Human (Homo sapiens) [TaxId: 9606]
(9)
1a
d4ehpa1
A:2-128
1b
d4ehpa2
A:129-252
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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