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4EGO
Biol. Unit 3
Info
Asym.Unit (284 KB)
Biol.Unit 1 (74 KB)
Biol.Unit 2 (73 KB)
Biol.Unit 3 (73 KB)
Biol.Unit 4 (72 KB)
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(1)
Title
:
THE X-RAY CRYSTAL STRUCTURE OF CYP199A4 IN COMPLEX WITH INDOLE-6-CARBOXYLIC ACID
Authors
:
W. Zhou, S. G. Bell, W. Yang, R. M. Zhou, A. B. H. Tan, L. -L. Wong
Date
:
31 Mar 12 (Deposition) - 20 Feb 13 (Release) - 20 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.76
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Cytochrome P450, Secondary Metabolites Biosynthesis, Transport, Catabolism, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. G. Bell, R. M. Zhou, W. Yang, A. B. H. Tan, A. S. Gentleman, L. -L. Wong, W. Zhou
Investigation Of The Substrate Range Of Cyp199A4: Modification Of The Partition Between Hydroxylation And Desaturation Activities By Substrate And Protein Engineerin
Chemistry V. 18 16677 2012
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: 1H-INDOLE-6-CARBOXYLIC ACID (1F1a)
1b: 1H-INDOLE-6-CARBOXYLIC ACID (1F1b)
1c: 1H-INDOLE-6-CARBOXYLIC ACID (1F1c)
1d: 1H-INDOLE-6-CARBOXYLIC ACID (1F1d)
1e: 1H-INDOLE-6-CARBOXYLIC ACID (1F1e)
1f: 1H-INDOLE-6-CARBOXYLIC ACID (1F1f)
1g: 1H-INDOLE-6-CARBOXYLIC ACID (1F1g)
1h: 1H-INDOLE-6-CARBOXYLIC ACID (1F1h)
1i: 1H-INDOLE-6-CARBOXYLIC ACID (1F1i)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
4d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
5h: SULFATE ION (SO4h)
View:
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Label:
No.
Name
Count
Type
Full Name
1
1F1
2
Ligand/Ion
1H-INDOLE-6-CARBOXYLIC ACID
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
GOL
1
Ligand/Ion
GLYCEROL
4
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(11, 11)
Info
All Sites
01: AC4 (SOFTWARE)
02: BC4 (SOFTWARE)
03: BC9 (SOFTWARE)
04: CC1 (SOFTWARE)
05: CC2 (SOFTWARE)
06: CC3 (SOFTWARE)
07: CC4 (SOFTWARE)
08: CC5 (SOFTWARE)
09: CC6 (SOFTWARE)
10: CC7 (SOFTWARE)
11: CC8 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC4
SOFTWARE
PRO A:90 , ARG A:92 , PRO A:94 , ARG C:142
BINDING SITE FOR RESIDUE 1F1 A 504
02
BC4
SOFTWARE
ARG B:109 , SER B:113 , GOL B:505 , HOH B:628 , HOH B:691 , HOH B:838 , HOH B:869 , LYS C:114
BINDING SITE FOR RESIDUE SO4 B 504
03
BC9
SOFTWARE
ILE C:97 , LEU C:98 , HIS C:105 , ARG C:109 , ALA C:248 , GLY C:249 , THR C:252 , THR C:253 , PHE C:298 , ARG C:300 , GLY C:350 , PHE C:351 , GLY C:352 , HIS C:356 , CYS C:358 , VAL C:359 , GLY C:360 , ALA C:364 , 1F1 C:502 , HOH C:610 , HOH C:620
BINDING SITE FOR RESIDUE HEM C 501
04
CC1
SOFTWARE
ARG C:92 , SER C:95 , PHE C:182 , SER C:244 , SER C:247 , ALA C:248 , PHE C:298 , HEM C:501 , HOH C:624
BINDING SITE FOR RESIDUE 1F1 C 502
05
CC2
SOFTWARE
LEU C:175 , PRO C:176 , ASP C:251 , ARG C:391 , HOH C:734 , HOH C:814
BINDING SITE FOR RESIDUE 1F1 C 503
06
CC3
SOFTWARE
LYS B:114 , ARG C:109 , SER C:113 , GOL C:507 , HOH C:647
BINDING SITE FOR RESIDUE SO4 C 504
07
CC4
SOFTWARE
ARG B:107 , HOH B:649 , HOH B:726 , ARG C:107 , HOH C:638
BINDING SITE FOR RESIDUE SO4 C 505
08
CC5
SOFTWARE
ARG C:60
BINDING SITE FOR RESIDUE SO4 C 506
09
CC6
SOFTWARE
SER C:113 , LEU C:116 , SER C:117 , VAL C:359 , GLN C:361 , LEU C:362 , SO4 C:504
BINDING SITE FOR RESIDUE GOL C 507
10
CC7
SOFTWARE
ARG C:92 , TYR C:177 , GLN C:203
BINDING SITE FOR RESIDUE CL C 508
11
CC8
SOFTWARE
TYR C:262 , ILE C:384 , HOH C:800 , ARG D:266 , ILE D:384 , HOH D:713
BINDING SITE FOR RESIDUE 1F1 D 501
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4egoa_ (A:)
1b: SCOP_d4egob_ (B:)
1c: SCOP_d4egoc_ (C:)
1d: SCOP_d4egod_ (D:)
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Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
automated matches
(157)
Protein domain
:
automated matches
(157)
Rhodopseudomonas palustris [TaxId: 316058]
(6)
1a
d4egoa_
A:
1b
d4egob_
B:
1c
d4egoc_
C:
1d
d4egod_
D:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain C
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (284 KB)
Header - Asym.Unit
Biol.Unit 1 (74 KB)
Header - Biol.Unit 1
Biol.Unit 2 (73 KB)
Header - Biol.Unit 2
Biol.Unit 3 (73 KB)
Header - Biol.Unit 3
Biol.Unit 4 (72 KB)
Header - Biol.Unit 4
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