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4EGN
Biol. Unit 4
Info
Asym.Unit (283 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (73 KB)
Biol.Unit 3 (74 KB)
Biol.Unit 4 (72 KB)
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Title
:
THE X-RAY CRYSTAL STRUCTURE OF CYP199A4 IN COMPLEX WITH VERATRIC ACID
Authors
:
W. Zhou, S. G. Bell, W. Yang, R. M. Zhou, A. B. H. Tan, L. -L. Wong
Date
:
31 Mar 12 (Deposition) - 20 Feb 13 (Release) - 20 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Cytochrome P450, Secondary Metabolites Biosynthesis, Transport, Catabolism, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. G. Bell, R. M. Zhou, W. Yang, A. B. H. Tan, A. S. Gentleman, L. -L. Wong, W. Zhou
Investigation Of The Substrate Range Of Cyp199A4: Modification Of The Partition Between Hydroxylation And Desaturation Activities By Substrate And Protein Engineerin
Chemistry V. 18 16677 2012
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Hetero Components
(4, 6)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
3d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
5a: 3,4-DIMETHOXYBENZOIC ACID (TWOa)
5b: 3,4-DIMETHOXYBENZOIC ACID (TWOb)
5c: 3,4-DIMETHOXYBENZOIC ACID (TWOc)
5d: 3,4-DIMETHOXYBENZOIC ACID (TWOd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
GOL
1
Ligand/Ion
GLYCEROL
3
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
SO4
3
Ligand/Ion
SULFATE ION
5
TWO
1
Ligand/Ion
3,4-DIMETHOXYBENZOIC ACID
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Sites
(8, 8)
Info
All Sites
1: AC2 (SOFTWARE)
2: CC1 (SOFTWARE)
3: CC2 (SOFTWARE)
4: CC3 (SOFTWARE)
5: CC4 (SOFTWARE)
6: CC5 (SOFTWARE)
7: CC6 (SOFTWARE)
8: CC7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
ARG A:109 , SER A:113 , GOL A:503 , HOH A:824 , LYS D:114
BINDING SITE FOR RESIDUE SO4 A 502
2
CC1
SOFTWARE
ILE D:97 , LEU D:98 , HIS D:105 , ARG D:109 , LEU D:116 , PHE D:160 , ALA D:248 , GLY D:249 , THR D:252 , THR D:253 , VAL D:295 , PHE D:298 , ARG D:300 , LEU D:323 , GLY D:350 , PHE D:351 , GLY D:352 , HIS D:356 , CYS D:358 , VAL D:359 , GLY D:360 , ALA D:364 , TWO D:506 , HOH D:607 , HOH D:622
BINDING SITE FOR RESIDUE HEM D 501
3
CC2
SOFTWARE
ARG D:109 , SER D:113 , GOL D:505 , HOH D:856
BINDING SITE FOR RESIDUE SO4 D 502
4
CC3
SOFTWARE
ARG A:107 , HOH A:692 , ARG D:107 , HOH D:703 , HOH D:799
BINDING SITE FOR RESIDUE SO4 D 503
5
CC4
SOFTWARE
ARG D:60 , HOH D:682
BINDING SITE FOR RESIDUE SO4 D 504
6
CC5
SOFTWARE
SER D:113 , LEU D:116 , SER D:117 , VAL D:359 , GLN D:361 , SO4 D:502 , HOH D:824
BINDING SITE FOR RESIDUE GOL D 505
7
CC6
SOFTWARE
ARG D:92 , SER D:95 , ILE D:97 , LEU D:98 , VAL D:181 , PHE D:182 , PHE D:185 , SER D:244 , SER D:247 , ALA D:248 , PHE D:298 , HEM D:501 , HOH D:640
BINDING SITE FOR RESIDUE TWO D 506
8
CC7
SOFTWARE
ARG D:92 , TYR D:177 , GLN D:203
BINDING SITE FOR RESIDUE CL D 507
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4egna_ (A:)
1b: SCOP_d4egnc_ (C:)
1c: SCOP_d4egnd_ (D:)
1d: SCOP_d4egnb_ (B:)
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Protein Domains
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Organisms
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)
Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
automated matches
(157)
Protein domain
:
automated matches
(157)
Rhodopseudomonas palustris [TaxId: 316058]
(6)
1a
d4egna_
A:
1b
d4egnc_
C:
1c
d4egnd_
D:
1d
d4egnb_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(0, 0)
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Chain D
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (283 KB)
Header - Asym.Unit
Biol.Unit 1 (73 KB)
Header - Biol.Unit 1
Biol.Unit 2 (73 KB)
Header - Biol.Unit 2
Biol.Unit 3 (74 KB)
Header - Biol.Unit 3
Biol.Unit 4 (72 KB)
Header - Biol.Unit 4
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