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4EGE
Biol. Unit 1
Info
Asym.Unit (67 KB)
Biol.Unit 1 (117 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF DIPEPTIDASE PEPE FROM MYCOBACTERIUM ULCERANS
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
30 Mar 12 (Deposition) - 25 Apr 12 (Release) - 22 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Ssgcid, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
[
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Hetero Components
(2, 30)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
2a: UNKNOWN ATOM OR ION (UNXa)
2b: UNKNOWN ATOM OR ION (UNXb)
2c: UNKNOWN ATOM OR ION (UNXc)
2d: UNKNOWN ATOM OR ION (UNXd)
2e: UNKNOWN ATOM OR ION (UNXe)
2f: UNKNOWN ATOM OR ION (UNXf)
2g: UNKNOWN ATOM OR ION (UNXg)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EDO
16
Ligand/Ion
1,2-ETHANEDIOL
2
UNX
14
Ligand/Ion
UNKNOWN ATOM OR ION
3
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:23 , GLN A:24 , GLN A:222 , VAL A:223
BINDING SITE FOR RESIDUE EDO A 401
02
AC2
SOFTWARE
GLN A:264 , ARG A:265
BINDING SITE FOR RESIDUE EDO A 402
03
AC3
SOFTWARE
ASP A:272 , ASP A:289
BINDING SITE FOR RESIDUE EDO A 403
04
AC4
SOFTWARE
TYR A:36 , ARG A:144 , CYS A:311 , HIS A:313 , ZN A:413
BINDING SITE FOR RESIDUE EDO A 405
05
AC5
SOFTWARE
ALA A:149 , VAL A:152 , HOH A:655
BINDING SITE FOR RESIDUE EDO A 406
06
AC6
SOFTWARE
GLY A:61 , VAL A:62 , VAL A:374
BINDING SITE FOR RESIDUE EDO A 407
07
AC7
SOFTWARE
PRO A:34 , ASP A:47 , THR A:48 , PHE A:49 , PRO A:118 , HIS A:121 , HOH A:531 , HOH A:547
BINDING SITE FOR RESIDUE EDO A 408
08
AC8
SOFTWARE
ASP A:94 , GLU A:368 , ZN A:410
BINDING SITE FOR RESIDUE ZN A 409
09
AC9
SOFTWARE
ARG A:268 , HIS A:367 , ZN A:409
BINDING SITE FOR RESIDUE ZN A 410
10
BC1
SOFTWARE
ASP A:242 , HIS A:306 , GLU A:335 , GLU A:349 , ZN A:412
BINDING SITE FOR RESIDUE ZN A 411
11
BC2
SOFTWARE
ASP A:230 , ASP A:242 , THR A:244 , GLU A:349 , ZN A:411
BINDING SITE FOR RESIDUE ZN A 412
12
BC3
SOFTWARE
ASP A:37 , ASP A:115 , EDO A:405 , HOH A:604 , HOH A:663
BINDING SITE FOR RESIDUE ZN A 413
13
BC4
SOFTWARE
GLU A:50 , HIS A:313 , HOH A:598 , HOH A:628
BINDING SITE FOR RESIDUE ZN A 414
14
BC5
SOFTWARE
CYS A:86 , ASP A:251 , HOH A:629
BINDING SITE FOR RESIDUE ZN A 415
15
BC6
SOFTWARE
HIS A:208 , HOH A:637 , HOH A:638 , HOH A:648
BINDING SITE FOR RESIDUE ZN A 416
16
BC7
SOFTWARE
GLU A:71 , HIS A:213 , HOH A:606 , HOH A:607
BINDING SITE FOR RESIDUE ZN A 417
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (67 KB)
Header - Asym.Unit
Biol.Unit 1 (117 KB)
Header - Biol.Unit 1
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