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4E57
Biol. Unit 1
Info
Asym.Unit (468 KB)
Biol.Unit 1 (234 KB)
Biol.Unit 2 (232 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SPACER 6AA-SHORTENED CEPHALOSPORIN ACYLASE MUTANT
Authors
:
J. Yin, Z. Zhang, G. Wu, X. Huang
Date
:
14 Mar 12 (Deposition) - 20 Mar 13 (Release) - 20 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cephalosporin Acylase, Spacer, Autocleavage, Hydrolase, Glutaryl-7- Aminocephalosporanic-Acid Acylase, N-Terminal Nucleophile (Ntn) Hydrolase Superfamily
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Yin, Z. Zhang, G. Wu, X. Huang
Spacer Shortened Cephalosporin Acylase
To Be Published
[
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CADMIUM ION (CDa)
1aa: CADMIUM ION (CDaa)
1ab: CADMIUM ION (CDab)
1ac: CADMIUM ION (CDac)
1ad: CADMIUM ION (CDad)
1ae: CADMIUM ION (CDae)
1af: CADMIUM ION (CDaf)
1ag: CADMIUM ION (CDag)
1b: CADMIUM ION (CDb)
1c: CADMIUM ION (CDc)
1d: CADMIUM ION (CDd)
1e: CADMIUM ION (CDe)
1f: CADMIUM ION (CDf)
1g: CADMIUM ION (CDg)
1h: CADMIUM ION (CDh)
1i: CADMIUM ION (CDi)
1j: CADMIUM ION (CDj)
1k: CADMIUM ION (CDk)
1l: CADMIUM ION (CDl)
1m: CADMIUM ION (CDm)
1n: CADMIUM ION (CDn)
1o: CADMIUM ION (CDo)
1p: CADMIUM ION (CDp)
1q: CADMIUM ION (CDq)
1r: CADMIUM ION (CDr)
1s: CADMIUM ION (CDs)
1t: CADMIUM ION (CDt)
1u: CADMIUM ION (CDu)
1v: CADMIUM ION (CDv)
1w: CADMIUM ION (CDw)
1x: CADMIUM ION (CDx)
1y: CADMIUM ION (CDy)
1z: CADMIUM ION (CDz)
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:662
BINDING SITE FOR RESIDUE CD A 701
02
AC2
SOFTWARE
ASP A:325
BINDING SITE FOR RESIDUE CD A 702
03
AC3
SOFTWARE
GLU A:161 , THR A:192
BINDING SITE FOR RESIDUE CD A 703
04
AC4
SOFTWARE
ASP A:506
BINDING SITE FOR RESIDUE CD A 704
05
AC5
SOFTWARE
ASP A:74
BINDING SITE FOR RESIDUE CD A 705
06
AC6
SOFTWARE
ASP A:123 , HOH A:977 , HOH A:1263
BINDING SITE FOR RESIDUE CD A 706
07
AC7
SOFTWARE
HIS A:650 , GLU A:679
BINDING SITE FOR RESIDUE CD A 707
08
AC8
SOFTWARE
HIS A:465 , HOH A:1471 , HOH A:1472
BINDING SITE FOR RESIDUE CD A 708
09
AC9
SOFTWARE
ASP A:555
BINDING SITE FOR RESIDUE CD A 709
10
BC1
SOFTWARE
ASP A:577
BINDING SITE FOR RESIDUE CD A 710
11
BC2
SOFTWARE
ASP A:328
BINDING SITE FOR RESIDUE CD A 711
12
BC3
SOFTWARE
ARG A:264 , GLU A:284
BINDING SITE FOR RESIDUE CD A 712
13
BC4
SOFTWARE
ASP A:425
BINDING SITE FOR RESIDUE CD A 713
14
BC5
SOFTWARE
GLU A:674
BINDING SITE FOR RESIDUE CD A 714
15
BC6
SOFTWARE
GLU A:316 , ASP A:320 , CD A:716
BINDING SITE FOR RESIDUE CD A 715
16
BC7
SOFTWARE
SER A:99 , ASP A:101 , GLU A:316 , CD A:715
BINDING SITE FOR RESIDUE CD A 716
17
BC8
SOFTWARE
ASP A:329
BINDING SITE FOR RESIDUE CD A 717
18
BC9
SOFTWARE
GLU A:610
BINDING SITE FOR RESIDUE CD A 718
19
CC1
SOFTWARE
ASP A:451 , ASP A:452
BINDING SITE FOR RESIDUE CD A 719
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4e57a_ (A:)
1b: SCOP_d4e57b_ (B:)
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Classes
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)
(
)
Folds
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Superfamilies
(
)
(
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Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Penicillin acylase, catalytic domain
(37)
Protein domain
:
automated matches
(3)
Pseudomonas sp. [TaxId: 81841]
(3)
1a
d4e57a_
A:
1b
d4e57b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (468 KB)
Header - Asym.Unit
Biol.Unit 1 (234 KB)
Header - Biol.Unit 1
Biol.Unit 2 (232 KB)
Header - Biol.Unit 2
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