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4E2X
Asym. Unit
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Asym.Unit (82 KB)
Biol.Unit 1 (76 KB)
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(1)
Title
:
X-RAY STRUCTURE OF THE Y222F MUTANT OF TCAB9, A C-3'-METHYLTRANSFERASE, IN COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEINE AND DTDP
Authors
:
N. A. Bruender, H. M. Holden
Date
:
09 Mar 12 (Deposition) - 25 Apr 12 (Release) - 30 May 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Kijanose, Tetronitrose, Tetradeoxy Sugar, Sugar Methylation, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. A. Bruender, H. M. Holden
Probing The Catalytic Mechanism Of A C-3'-Methyltransferase Involved In The Biosynthesis Of D-Tetronitrose.
Protein Sci. V. 21 876 2012
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
2a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
3a: THYMIDINE-5'-DIPHOSPHATE (TYDa)
4a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
3
TYD
1
Ligand/Ion
THYMIDINE-5'-DIPHOSPHATE
4
ZN
1
Ligand/Ion
ZINC ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:13 , CYS A:16 , CYS A:54 , CYS A:57
BINDING SITE FOR RESIDUE ZN A 501
2
AC2
SOFTWARE
LEU A:93 , ASP A:96 , PHE A:97 , ARG A:259 , HOH A:865 , HOH A:902
BINDING SITE FOR RESIDUE EDO A 502
3
AC3
SOFTWARE
ARG A:164 , HOH A:1031 , HOH A:1034
BINDING SITE FOR RESIDUE EDO A 503
4
AC4
SOFTWARE
SER A:319 , VAL A:320 , PRO A:340 , ASP A:341 , LEU A:342 , HIS A:344 , HOH A:827 , HOH A:967
BINDING SITE FOR RESIDUE EDO A 504
5
AC5
SOFTWARE
GLU A:22 , ASP A:25 , THR A:103 , HOH A:606 , HOH A:1002
BINDING SITE FOR RESIDUE EDO A 505
6
AC6
SOFTWARE
PHE A:72 , TYR A:76 , SER A:80 , PHE A:90 , ILE A:112 , GLY A:113 , ASN A:115 , PHE A:133 , GLU A:134 , PRO A:135 , SER A:136 , PHE A:154 , PHE A:155 , ALA A:176 , ASN A:177 , THR A:178 , ILE A:182 , TYR A:184 , HOH A:659 , HOH A:701 , HOH A:703 , HOH A:714
BINDING SITE FOR RESIDUE SAH A 506
7
AC7
SOFTWARE
TYR A:78 , HIS A:254 , GLY A:324 , THR A:326 , ALA A:327 , LYS A:328 , ASP A:348 , THR A:349 , THR A:350 , LYS A:353 , ASN A:385 , HIS A:386 , GLU A:389 , ILE A:390 , LYS A:393 , HOH A:615 , HOH A:652
BINDING SITE FOR RESIDUE TYD A 507
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Exons
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SCOP Domains
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CATH Domains
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Asymmetric Unit 1
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Asym.Unit (82 KB)
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