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4DZ3
Asym. Unit
Info
Asym.Unit (85 KB)
Biol.Unit 1 (78 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A PEPTIDYL-PROLYL CIS-TRANS ISOMERASE WITH SURFACE MUTATION M61H FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH FK506
Authors
:
Seattle Structural Genomics Center For Infectious Disease (S
Date
:
29 Feb 12 (Deposition) - 28 Mar 12 (Release) - 19 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ssgcid, Isomerase, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. W. Begley, D. Fox, D. Jenner, C. Juli, P. G. Pierce, J. Abendroth, M. Muruthi, K. Safford, V. Anderson, K. Atkins, S. R. Barnes, S. O. Moen A. C. Raymond, R. Stacy, P. J. Myler, B. L. Staker, N. J. Harmer, I. H. Norville, U. Holzgrabe, M. Sarkar-Tyson, T. E. Edwards, D. D. Lorimer
A Structural Biology Approach Enables The Development Of Antimicrobials Targeting Bacterial Immunophilins.
Antimicrob. Agents Chemother. V. 58 1458 2014
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
4a: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN (FK5a)
4b: 8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN (FK5b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
5
Ligand/Ion
ACETATE ION
2
CA
2
Ligand/Ion
CALCIUM ION
3
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
4
FK5
2
Ligand/Ion
8-DEETHYL-8-[BUT-3-ENYL]-ASCOMYCIN
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:33 , PHE A:43 , ASP A:44 , PHE A:53 , HIS A:61 , VAL A:62 , ILE A:63 , TRP A:66 , GLY A:88 , TYR A:89 , PHE A:106 , HOH A:357 , GLY B:60 , HIS B:61 , VAL B:62 , FK5 B:201
BINDING SITE FOR RESIDUE FK5 A 201
02
AC2
SOFTWARE
ASP A:112 , VAL A:113 , ASP B:51 , PRO B:52 , HOH B:321 , HOH B:333
BINDING SITE FOR RESIDUE CA A 202
03
AC3
SOFTWARE
THR A:28 , ALA B:54 , VAL B:56 , EDO B:203
BINDING SITE FOR RESIDUE EDO A 203
04
AC4
SOFTWARE
THR A:2 , VAL A:4 , GLU A:13 , ASP A:14 , HOH A:353
BINDING SITE FOR RESIDUE EDO A 204
05
AC5
SOFTWARE
SER A:1 , THR B:6
BINDING SITE FOR RESIDUE EDO A 205
06
AC6
SOFTWARE
TYR A:33 , THR A:34
BINDING SITE FOR RESIDUE ACT A 206
07
AC7
SOFTWARE
GLY A:60 , HIS A:61 , VAL A:62 , FK5 A:201 , TYR B:33 , PHE B:43 , ASP B:44 , ARG B:49 , PHE B:53 , HIS B:61 , VAL B:62 , ILE B:63 , TRP B:66 , GLY B:88 , TYR B:89 , PHE B:106 , ACT B:208
BINDING SITE FOR RESIDUE FK5 B 201
08
AC8
SOFTWARE
ASP A:51 , PRO A:52 , HOH A:321 , HOH A:326 , ASP B:112 , VAL B:113
BINDING SITE FOR RESIDUE CA B 202
09
AC9
SOFTWARE
VAL A:56 , EDO A:203 , THR B:28
BINDING SITE FOR RESIDUE EDO B 203
10
BC1
SOFTWARE
THR B:2 , GLU B:13 , ASP B:14
BINDING SITE FOR RESIDUE EDO B 204
11
BC2
SOFTWARE
SER A:30 , ASP A:112 , HOH A:341 , SER B:30 , PRO B:52 , ASP B:112
BINDING SITE FOR RESIDUE EDO B 205
12
BC3
SOFTWARE
HIS B:32 , THR B:34
BINDING SITE FOR RESIDUE ACT B 206
13
BC4
SOFTWARE
THR B:38 , ASP B:39 , THR B:82 , VAL B:105
BINDING SITE FOR RESIDUE ACT B 207
14
BC5
SOFTWARE
GLN B:86 , GLY B:88 , GLY B:90 , FK5 B:201 , HOH B:370
BINDING SITE FOR RESIDUE ACT B 208
15
BC6
SOFTWARE
LYS A:11 , HOH A:361 , THR B:5 , LYS B:11 , HOH B:344
BINDING SITE FOR RESIDUE ACT B 209
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4dz3a_ (A:)
1b: SCOP_d4dz3b_ (B:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FKBP-like
(309)
Superfamily
:
FKBP-like
(198)
Family
:
automated matches
(40)
Protein domain
:
automated matches
(40)
Burkholderia pseudomallei [TaxId: 320372]
(2)
1a
d4dz3a_
A:
1b
d4dz3b_
B:
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (85 KB)
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