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4DZ0
Biol. Unit 1
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Asym.Unit (39 KB)
Biol.Unit 1 (708 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CU-ADDUCT OF HUMAN H-FERRITIN VARIANT MIC1 LABELED WITH A DANSYL FLUOROPHORE
Authors
:
F. A. Tezcan, D. J. E. Huard
Date
:
29 Feb 12 (Deposition) - 23 Jan 13 (Release) - 06 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (24x)
Keywords
:
Four-Helix Bundle, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
D. J. Huard, K. M. Kane, F. A. Tezcan
Re-Engineering Protein Interfaces Yields Copper-Inducible Ferritin Cage Assembly.
Nat. Chem. Biol. V. 9 169 2013
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Hetero Components
(1, 24)
Info
All Hetero Components
1a: 5-(1-SULFONAPHTHYL)-ACETYLAMINO-ET... (AENa)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
3a: COPPER (II) ION (CUa)
3b: COPPER (II) ION (CUb)
3c: COPPER (II) ION (CUc)
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No.
Name
Count
Type
Full Name
1
AEN
24
Ligand/Ion
5-(1-SULFONAPHTHYL)-ACETYLAMINO-ETHYLAMINE
2
CA
-1
Ligand/Ion
CALCIUM ION
3
CU
-1
Ligand/Ion
COPPER (II) ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:53 , HIS A:56 , HIS A:57 , HIS A:60
BINDING SITE FOR RESIDUE AEN A 201
2
AC2
SOFTWARE
HIS A:56 , HIS A:60 , HIS A:63 , HIS A:67
BINDING SITE FOR RESIDUE CU A 202
3
AC3
SOFTWARE
GLU A:27 , GLU A:62 , HIS A:65
BINDING SITE FOR RESIDUE CU A 203
4
AC4
SOFTWARE
HIS A:173
BINDING SITE FOR RESIDUE CU A 204
5
AC5
SOFTWARE
ASP A:131 , GLU A:134 , HOH A:339
BINDING SITE FOR RESIDUE CA A 205
6
AC6
SOFTWARE
ASP A:84 , GLN A:86
BINDING SITE FOR RESIDUE CA A 206
7
AC7
SOFTWARE
GLN A:58 , GLU A:61 , GLU A:62 , GLU A:107 , HOH A:305 , HOH A:319
BINDING SITE FOR RESIDUE CA A 207
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 72)
Info
All PROSITE Patterns/Profiles
1: FERRITIN_LIKE (A:10-159)
2: FERRITIN_1 (A:61-79)
3: FERRITIN_2 (A:126-146)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FERRITIN_LIKE
PS50905
Ferritin-like diiron domain profile.
FRIH_HUMAN
11-160
24
A:10-159
2
FERRITIN_1
PS00540
Ferritin iron-binding regions signature 1.
FRIH_HUMAN
62-80
24
A:61-79
3
FERRITIN_2
PS00204
Ferritin iron-binding regions signature 2.
FRIH_HUMAN
127-147
24
A:126-146
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Exons
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4dz0a_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
Ferritin-like
(533)
Superfamily
:
Ferritin-like
(489)
Family
:
Ferritin
(232)
Protein domain
:
automated matches
(70)
Human (Homo sapiens) [TaxId: 9606]
(15)
1a
d4dz0a_
A:
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CATH Domains
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Chain A
Asymmetric Unit 1
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Asymmetric Unit 24
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Asym.Unit (39 KB)
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