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Asym. Unit
Info
Asym.Unit (1.2 MB)
Biol.Unit 1, α-C (1.2 MB)
Biol.Unit 1 (1.2 MB)
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(1)
Title
:
TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLVES AN ACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A SWITCH-LOOP
Authors
:
T. Eicher, H. Cha, M. A. Seeger, L. Brandstaetter, J. El-Delik, J. A. Boh W. V. Kern, F. Verrey, M. G. Gruetter, K. Diederichs, K. M. Pos
Date
:
27 Feb 12 (Deposition) - 02 May 12 (Release) - 29 Jan 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E (1x)
Keywords
:
Darpin, Multidrug Efflux Protein, Membrane Protein, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Eicher, H. J. Cha, M. A. Seeger, L. Brandstatter, J. El-Delik, J. A. Bohnert, W. V. Kern, F. Verrey, M. G. Grutter, K. Diederichs, K. M. Pos
Transport Of Drugs By The Multidrug Transporter Acrb Involves An Access And A Deep Binding Pocket That Are Separated By A Switch-Loop.
Proc. Natl. Acad. Sci. Usa V. 109 5687 2012
[
close entry info
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Hetero Components
(12, 51)
Info
All Hetero Components
01a: TETRADECANE (C14a)
02a: DECANE (D10a)
02b: DECANE (D10b)
02c: DECANE (D10c)
02d: DECANE (D10d)
02e: DECANE (D10e)
02f: DECANE (D10f)
03a: DODECANE (D12a)
03b: DODECANE (D12b)
03c: DODECANE (D12c)
03d: DODECANE (D12d)
04a: NONANE (DD9a)
05a: GLYCEROL (GOLa)
05b: GLYCEROL (GOLb)
05c: GLYCEROL (GOLc)
05d: GLYCEROL (GOLd)
05e: GLYCEROL (GOLe)
05f: GLYCEROL (GOLf)
05g: GLYCEROL (GOLg)
05h: GLYCEROL (GOLh)
05i: GLYCEROL (GOLi)
05j: GLYCEROL (GOLj)
05k: GLYCEROL (GOLk)
05l: GLYCEROL (GOLl)
05m: GLYCEROL (GOLm)
05n: GLYCEROL (GOLn)
05o: GLYCEROL (GOLo)
06a: HEXANE (HEXa)
06b: HEXANE (HEXb)
06c: HEXANE (HEXc)
06d: HEXANE (HEXd)
06e: HEXANE (HEXe)
07a: DODECYL-BETA-D-MALTOSIDE (LMTa)
07b: DODECYL-BETA-D-MALTOSIDE (LMTb)
07c: DODECYL-BETA-D-MALTOSIDE (LMTc)
07d: DODECYL-BETA-D-MALTOSIDE (LMTd)
07e: DODECYL-BETA-D-MALTOSIDE (LMTe)
07f: DODECYL-BETA-D-MALTOSIDE (LMTf)
07g: DODECYL-BETA-D-MALTOSIDE (LMTg)
07h: DODECYL-BETA-D-MALTOSIDE (LMTh)
08a: DODECYL-ALPHA-D-MALTOSIDE (LMUa)
09a: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYL... (MIYa)
10a: N-OCTANE (OCTa)
10b: N-OCTANE (OCTb)
10c: N-OCTANE (OCTc)
10d: N-OCTANE (OCTd)
10e: N-OCTANE (OCTe)
10f: N-OCTANE (OCTf)
10g: N-OCTANE (OCTg)
11a: SULFATE ION (SO4a)
12a: UNDECANE (UNDa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
C14
1
Ligand/Ion
TETRADECANE
2
D10
6
Ligand/Ion
DECANE
3
D12
4
Ligand/Ion
DODECANE
4
DD9
1
Ligand/Ion
NONANE
5
GOL
15
Ligand/Ion
GLYCEROL
6
HEX
5
Ligand/Ion
HEXANE
7
LMT
8
Ligand/Ion
DODECYL-BETA-D-MALTOSIDE
8
LMU
1
Ligand/Ion
DODECYL-ALPHA-D-MALTOSIDE
9
MIY
1
Ligand/Ion
(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE
10
OCT
7
Ligand/Ion
N-OCTANE
11
SO4
1
Ligand/Ion
SULFATE ION
12
UND
1
Ligand/Ion
UNDECANE
[
close Hetero Component info
]
Sites
(46, 46)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:758 , ASP A:761 , LYS A:770 , HOH A:1225 , HOH A:1299 , HOH A:1629 , GLN B:67
BINDING SITE FOR RESIDUE GOL A 1101
02
AC2
SOFTWARE
VAL A:32 , VAL A:341 , ILE A:348 , PHE A:380 , HOH A:1398 , HOH A:1465 , LMT B:1110
BINDING SITE FOR RESIDUE LMT A 1102
03
AC3
SOFTWARE
TYR A:467 , PHE A:556 , SER A:561 , GLY A:870 , ASN A:871 , TYR A:877 , LEU A:881 , ASN A:923 , GLN A:928
BINDING SITE FOR RESIDUE LMT A 1103
04
AC4
SOFTWARE
GLY A:440 , CYS A:887 , ALA A:890 , LEU A:891 , ARG C:8 , ILE C:15
BINDING SITE FOR RESIDUE LMT A 1104
05
AC5
SOFTWARE
PHE A:885 , TRP A:895
BINDING SITE FOR RESIDUE OCT A 1105
06
AC6
SOFTWARE
TRP A:895
BINDING SITE FOR RESIDUE OCT A 1106
07
AC7
SOFTWARE
TRP A:13 , TRP B:895
BINDING SITE FOR RESIDUE D10 A 1107
08
AC8
SOFTWARE
ASP A:566 , TRP A:634 , GLY A:994 , SER A:997
BINDING SITE FOR RESIDUE HEX A 1108
09
AC9
SOFTWARE
HIS A:338 , GLU A:339 , LYS A:342 , VAL A:345 , GLU A:346 , ILE A:349 , ASP A:633 , ALA A:635
BINDING SITE FOR RESIDUE LMT A 1109
10
BC1
SOFTWARE
PRO A:50 , ARG A:185 , GLU A:273 , GLY A:755 , TYR A:772 , MET A:774 , HOH A:1658
BINDING SITE FOR RESIDUE GOL A 1110
11
BC2
SOFTWARE
ARG A:168 , GLU A:309 , HOH A:1327 , LEU B:75 , ASN B:820
BINDING SITE FOR RESIDUE GOL B 1101
12
BC3
SOFTWARE
ARG A:8 , GLY B:440 , MET B:447 , LEU B:891
BINDING SITE FOR RESIDUE D12 A 1111
13
BC4
SOFTWARE
LEU B:111 , MET B:115 , GLY B:126 , VAL B:127 , HOH B:1332 , GLN C:112 , PRO C:116
BINDING SITE FOR RESIDUE GOL B 1102
14
BC5
SOFTWARE
PHE B:178 , GLY B:179 , ASN B:274 , ASP B:276 , ILE B:277 , ALA B:279 , ARG B:620 , HOH B:1301 , HOH B:1327
BINDING SITE FOR RESIDUE MIY B 1103
15
BC6
SOFTWARE
SER B:530 , GLY B:533 , ARG B:536 , SER B:537 , ARG B:540 , TYR B:541
BINDING SITE FOR RESIDUE LMT B 1104
16
BC7
SOFTWARE
TRP B:895
BINDING SITE FOR RESIDUE D10 B 1105
17
BC8
SOFTWARE
PHE B:885 , PHE B:899
BINDING SITE FOR RESIDUE D12 B 1106
18
BC9
SOFTWARE
ASP B:301
BINDING SITE FOR RESIDUE D10 B 1107
19
CC1
SOFTWARE
PHE B:4
BINDING SITE FOR RESIDUE HEX B 1108
20
CC2
SOFTWARE
TRP B:13 , HOH B:1478 , TRP C:895
BINDING SITE FOR RESIDUE C14 B 1109
21
CC3
SOFTWARE
LEU A:28 , LYS A:29 , LMT A:1102 , SER B:450 , PHE B:458 , ASN B:871 , GLN B:872 , LEU B:876
BINDING SITE FOR RESIDUE LMT B 1110
22
CC4
SOFTWARE
TYR B:467 , PHE B:556 , GLU B:866 , ASN B:923 , GLN B:928
BINDING SITE FOR RESIDUE LMT B 1111
23
CC5
SOFTWARE
PHE B:727 , PRO B:783 , SER B:805 , SER B:806 , SER B:807 , HOH B:1443 , HOH B:1613
BINDING SITE FOR RESIDUE GOL B 1113
24
CC6
SOFTWARE
ASP B:566 , PHE B:628 , PHE B:664 , PHE B:666 , ASN B:667 , LEU B:668 , PRO B:669 , VAL B:672
BINDING SITE FOR RESIDUE LMU B 1114
25
CC7
SOFTWARE
ASN B:231 , ALA B:232 , SER B:233 , HOH B:1282 , SER C:84 , THR C:724 , HOH C:1436
BINDING SITE FOR RESIDUE GOL B 1115
26
CC8
SOFTWARE
ARG B:239 , ASN B:760 , ASP B:761 , HOH B:1469 , PRO C:119 , GLN C:120 , GLU C:121
BINDING SITE FOR RESIDUE GOL B 1116
27
CC9
SOFTWARE
ASN A:231 , SER A:233 , HOH A:1244 , SER B:84 , GLY B:581 , THR B:724 , PRO B:814 , HOH B:1359
BINDING SITE FOR RESIDUE GOL B 1117
28
DC1
SOFTWARE
GLY A:581 , GLN C:218 , ASN C:231 , SER C:233 , HOH C:1446
BINDING SITE FOR RESIDUE GOL C 1101
29
DC2
SOFTWARE
SER C:530 , GLY C:533 , ARG C:536 , SER C:537 , ARG C:540 , TYR C:541 , PHE C:1020 , D10 C:1120 , HOH C:1714
BINDING SITE FOR RESIDUE LMT C 1102
30
DC3
SOFTWARE
TRP C:895
BINDING SITE FOR RESIDUE OCT C 1103
31
DC4
SOFTWARE
TRP C:13 , ILE C:17
BINDING SITE FOR RESIDUE D12 C 1104
32
DC5
SOFTWARE
SER C:894 , SER C:896 , LYS C:950
BINDING SITE FOR RESIDUE OCT C 1105
33
DC6
SOFTWARE
LEU C:891
BINDING SITE FOR RESIDUE OCT C 1106
34
DC7
SOFTWARE
MET C:1
BINDING SITE FOR RESIDUE D10 C 1107
35
DC8
SOFTWARE
PHE C:458
BINDING SITE FOR RESIDUE D12 C 1108
36
DC9
SOFTWARE
PHE C:458
BINDING SITE FOR RESIDUE D10 C 1109
37
EC1
SOFTWARE
SER C:476
BINDING SITE FOR RESIDUE HEX C 1110
38
EC2
SOFTWARE
PHE C:388 , ARG C:468
BINDING SITE FOR RESIDUE DD9 C 1111
39
EC3
SOFTWARE
ASP C:566 , GLU C:567 , ASP C:568 , SER C:997 , GLY C:998 , HOH C:1643
BINDING SITE FOR RESIDUE GOL C 1114
40
EC4
SOFTWARE
ARG C:185 , GLU C:273 , ASN C:274 , GLY C:755 , TYR C:772 , MET C:774 , HOH C:1438
BINDING SITE FOR RESIDUE GOL C 1115
41
EC5
SOFTWARE
GLN C:151 , SER C:155 , GLY C:179 , SER C:180 , ASN C:274 , TYR C:275 , ILE C:277 , HOH C:1209 , HOH C:1249
BINDING SITE FOR RESIDUE GOL C 1117
42
EC6
SOFTWARE
LYS C:55 , GLY C:691 , HIS C:692 , HOH C:1384 , HOH C:1580 , HOH C:1700
BINDING SITE FOR RESIDUE SO4 C 1118
43
EC7
SOFTWARE
ASN B:700 , ARG D:23 , TRP D:57 , HIS D:59 , HOH D:334
BINDING SITE FOR RESIDUE GOL D 201
44
EC8
SOFTWARE
TYR A:811 , ARG E:23 , ASP E:44
BINDING SITE FOR RESIDUE GOL E 201
45
EC9
SOFTWARE
TYR C:527 , LMT C:1102
BINDING SITE FOR RESIDUE D10 C 1120
46
FC1
SOFTWARE
HOH B:1230 , ASP D:143 , PHE D:145 , HOH D:322
BINDING SITE FOR RESIDUE GOL D 202
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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End label:
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
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