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4DNK
Asym. Unit
Info
Asym.Unit (173 KB)
Biol.Unit 1 (165 KB)
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Title
:
CRYSTAL STRUCTURE OF A TYROSINE 3-MONOOXYGENASE/TRYPTOPHAN 5-MONOOXYGENASE ACTIVATION PROTEIN, BETA POLYPEPTIDE (YWHAB) FROM HOMO SAPIENS AT 2.20 A RESOLUTION.
Authors
:
Joint Center For Structural Genomics (Jcsg), Partnership For Biology (Tcell)
Date
:
08 Feb 12 (Deposition) - 22 Feb 12 (Release) - 21 Oct 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
14-3-3 Domain, Phosphorylation, Protein-Protein Binding, Cell Signaling, Cell Regulation, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi- Biology, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
Joint Center For Structural Genomics (Jcsg), Partnership For T-Cell Biology (Tcell)
Crystal Structure Of A Tyrosine 3-Monooxygenase/Tryptophan 5-Monooxygenase Activation Protein, Beta Polypeptide (Ywhaq From Homo Sapiens At 2. 20 A Resolution
To Be Published
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Hetero Components
(3, 22)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
3c: PHOSPHATE ION (PO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
MSE
15
Mod. Amino Acid
SELENOMETHIONINE
3
PO4
3
Ligand/Ion
PHOSPHATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:85 , GLU A:89 , VAL A:134 , ALA A:135 , SER A:136
BINDING SITE FOR RESIDUE PO4 A 301
2
AC2
SOFTWARE
ARG A:20 , TYR A:21 , ASP A:22 , ASP A:23
BINDING SITE FOR RESIDUE EDO A 302
3
AC3
SOFTWARE
LYS A:159 , ARG A:169 , GLU A:200
BINDING SITE FOR RESIDUE EDO A 303
4
AC4
SOFTWARE
ASN A:185 , LYS B:70
BINDING SITE FOR RESIDUE EDO A 304
5
AC5
SOFTWARE
LYS A:51 , GLY A:55 , ARG A:58 , TYR A:130 , HOH A:493
BINDING SITE FOR RESIDUE EDO A 305
6
AC6
SOFTWARE
THR B:2 , GLU B:7 , ASP B:225
BINDING SITE FOR RESIDUE PO4 B 301
7
AC7
SOFTWARE
ARG B:85 , GLU B:89 , VAL B:134 , ALA B:135 , SER B:136
BINDING SITE FOR RESIDUE PO4 B 302
[
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_064762 (V99I, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_064762
V
99
I
1433B_HUMAN
Unclassified
---
A/B
V
99
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: 1433_1 (A:43-53,B:43-53)
2: 1433_2 (A:213-232,B:213-232)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
1433_1
PS00796
14-3-3 proteins signature 1.
1433B_HUMAN
43-53
2
A:43-53
B:43-53
2
1433_2
PS00797
14-3-3 proteins signature 2.
1433B_HUMAN
213-232
2
A:213-232
B:213-232
[
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Exons
(5, 10)
Info
All Exons
Exon 1.4b (A:2-100 | B:1-100)
Exon 1.6b (A:101-142 | B:101-142)
Exon 1.7b (A:142-196 | B:142-196)
Exon 1.8b (A:197-228 | B:197-228)
Exon 1.9b (A:229-233 | B:229-234)
View:
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All Exon Boundaries
1: Boundary 1.3b/1.4b
2: Boundary 1.4b/1.6b
3: Boundary 1.6b/1.7b
4: Boundary 1.7b/1.8b
5: Boundary 1.8b/1.9b
6: Boundary 1.9b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000372839
1c
ENSE00001812557
chr20:
43514352-43514527
176
1433B_HUMAN
-
0
0
-
-
1.3b
ENST00000372839
3b
ENSE00001041330
chr20:
43516289-43516383
95
1433B_HUMAN
-
0
0
-
-
1.4b
ENST00000372839
4b
ENSE00002171948
chr20:
43530172-43530474
303
1433B_HUMAN
1-100
100
2
A:2-100
B:1-100
99
100
1.6b
ENST00000372839
6b
ENSE00000662289
chr20:
43532634-43532757
124
1433B_HUMAN
101-142
42
2
A:101-142
B:101-142
42
42
1.7b
ENST00000372839
7b
ENSE00000662290
chr20:
43533609-43533772
164
1433B_HUMAN
142-196
55
2
A:142-196
B:142-196
55
55
1.8b
ENST00000372839
8b
ENSE00000662291
chr20:
43534642-43534737
96
1433B_HUMAN
197-228
32
2
A:197-228
B:197-228
32
32
1.9b
ENST00000372839
9b
ENSE00001458785
chr20:
43535023-43537173
2151
1433B_HUMAN
229-246
18
2
A:229-233
B:229-234
5
6
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4dnka_ (A:)
1b: SCOP_d4dnkb_ (B:)
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
14-3-3 protein
(60)
Family
:
14-3-3 protein
(60)
Protein domain
:
automated matches
(43)
Human (Homo sapiens) [TaxId: 9606]
(38)
1a
d4dnka_
A:
1b
d4dnkb_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (173 KB)
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