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4DH0
Asym. Unit
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Asym.Unit (25 KB)
Biol.Unit 1 (21 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF 28-O-METHYLRAPAMYCIN COMPLEXED WITH FKBP12: IS THE CYCLOHEXYL MOIETY PART OF THE EFFECTOR DOMAIN OF RAPAMYCIN?
Authors
:
J. Kallen
Date
:
27 Jan 12 (Deposition) - 15 Feb 12 (Release) - 15 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Peptidyl-Prolyl Cis-Trans Isomerase, Isomerase-Immunosuppressant Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Kallen, R. Sedrani, S. Cottens
X-Ray Crystal Structure Of 28-O-Methylrapamycin Complexed With Fkbp12: Is The Cyclohexyl Moiety Part Of The Effector Domain Of Rapamycin?
J. Am. Chem. Soc. V. 118 5857 1996
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 28-O-METHYLRAPAMYCIN (MR8a)
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No.
Name
Count
Type
Full Name
1
MR8
1
Ligand/Ion
28-O-METHYLRAPAMYCIN
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:5 , THR A:6 , TYR A:26 , THR A:27 , PHE A:36 , ASP A:37 , PHE A:46 , GLU A:54 , VAL A:55 , ILE A:56 , TRP A:59 , ARG A:71 , LYS A:73 , ALA A:81 , TYR A:82 , ASP A:100 , HOH A:321
BINDING SITE FOR RESIDUE MR8 A 201
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: FKBP_PPIASE (A:19-107)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FKBP_PPIASE
PS50059
FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.
FKB1A_HUMAN
20-108
1
A:19-107
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Exons
(4, 4)
Info
All Exons
Exon 1.1a (A:1-12)
Exon 1.1f (A:12-28)
Exon 1.4 (A:28-65)
Exon 1.5a (A:66-107)
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1: Boundary -/1.1a
2: Boundary 1.1a/1.1f
3: Boundary 1.1f/1.4
4: Boundary 1.4/1.5a
5: Boundary 1.5a/1.7f
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000400137
1a
ENSE00001561754
chr20:
1373806-1373606
201
FKB1A_HUMAN
1-13
13
1
A:1-12
12
1.1f
ENST00000400137
1f
ENSE00001107838
chr20:
1373525-1373478
48
FKB1A_HUMAN
13-29
17
1
A:12-28
17
1.4
ENST00000400137
4
ENSE00000858591
chr20:
1356247-1356135
113
FKB1A_HUMAN
29-66
38
1
A:28-65
38
1.5a
ENST00000400137
5a
ENSE00000858590
chr20:
1352884-1352720
165
FKB1A_HUMAN
67-108
42
1
A:66-107
42
1.7f
ENST00000400137
7f
ENSE00001872186
chr20:
1350716-1349622
1095
FKB1A_HUMAN
-
0
0
-
-
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d4dh0a_ (A:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FKBP-like
(309)
Superfamily
:
FKBP-like
(198)
Family
:
FKBP immunophilin/proline isomerase
(153)
Protein domain
:
FK-506 binding protein (FKBP12), an immunophilin
(44)
Human (Homo sapiens) [TaxId: 9606]
(42)
1a
d4dh0a_
A:
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CATH Domains
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Pfam Domains
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