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4DEN
Asym. Unit
Info
Asym.Unit (27 KB)
Biol.Unit 1 (22 KB)
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(1)
Title
:
STRUCTURAL INSIGHTSINTO POTENT, SPECIFIC ANTI-HIV PROPERTY OF ACTINOHIVIN; CRYSTAL STRUCTURE OF ACTINOHIVIN IN COMPLEX WITH ALPHA(1-2) MANNOBIOSE MOIETY OF HIGH-MANNOSE TYPE GLYCAN OF GP120
Authors
:
M. M. Hoque, K. Suzuki, M. Tsunoda, J. Jiang, F. Zhang, A. Takahashi, O. N X. Zhang, T. Sekiguchi, H. Tanaka, S. Omura, A. Takenaka
Date
:
20 Jan 12 (Deposition) - 28 Nov 12 (Release) - 28 Nov 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Anti-Hiv Lectin, Molecular Recognition, High-Mannose Type Glycan, Antiviral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. M. Hoque, K. Suzuki, M. Tsunoda, J. Jiang, F. Zhang, A. Takahashi, N. Ohbayashi, X. Zhang, H. Tanaka, S. Omura, A. Takenaka
Structural Insights Into The Specific Anti-Hiv Property Of Actinohivin: Structure Of Its Complex With The Alpha(1– 2)Mannobiose Moiety Of Gp120
Acta Crystallogr. , Sect. D V. 68 1671 2012
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: 2-O-ALPHA-D-MANNOPYRANOSYL-ALPHA-D... (2M4a)
1b: 2-O-ALPHA-D-MANNOPYRANOSYL-ALPHA-D... (2M4b)
1c: 2-O-ALPHA-D-MANNOPYRANOSYL-ALPHA-D... (2M4c)
2a: POTASSIUM ION (Ka)
2b: POTASSIUM ION (Kb)
2c: POTASSIUM ION (Kc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
2M4
3
Ligand/Ion
2-O-ALPHA-D-MANNOPYRANOSYL-ALPHA-D-MANNOPYRANOSE
2
K
3
Ligand/Ion
POTASSIUM ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:61 , TYR A:69 , LEU A:71 , ASN A:74 , GLY A:75 , GLY A:76 , ASN A:77 , TYR A:78 , ASP A:99 , SER A:100 , TYR A:107 , ASN A:112 , GLY A:114 , SER A:115 , TYR A:116 , GLN A:117 , LYS A:118 , ASP A:137 , SER A:138 , TYR A:145 , LEU A:147 , ASN A:150 , GLY A:151 , GLY A:152 , ASN A:153 , TYR A:154 , LYS A:156 , 2M4 A:202 , 2M4 A:203 , K A:204 , K A:205 , K A:206 , HOH A:310 , HOH A:340 , HOH A:364
BINDING SITE FOR RESIDUE 2M4 A 201
2
AC2
SOFTWARE
GLN A:55 , ASP A:61 , SER A:62 , ASN A:63 , TYR A:69 , LEU A:71 , ASN A:74 , GLY A:75 , GLY A:76 , ASN A:77 , TYR A:78 , ASP A:99 , SER A:100 , ASN A:101 , TYR A:107 , ASN A:112 , GLY A:113 , GLY A:114 , SER A:115 , TYR A:116 , GLN A:117 , LYS A:118 , ASP A:137 , SER A:138 , ASN A:139 , TYR A:145 , ASN A:150 , GLY A:151 , GLY A:152 , ASN A:153 , TYR A:154 , LYS A:156 , 2M4 A:201 , 2M4 A:203 , K A:204 , K A:205 , K A:206 , HOH A:310 , HOH A:340 , HOH A:364
BINDING SITE FOR RESIDUE 2M4 A 202
3
AC3
SOFTWARE
GLN A:55 , ASP A:61 , TYR A:69 , LEU A:71 , ASN A:74 , GLY A:75 , GLY A:76 , ASN A:77 , TYR A:78 , ASP A:99 , SER A:100 , TYR A:107 , ASN A:112 , GLY A:113 , GLY A:114 , SER A:115 , TYR A:116 , GLN A:117 , LYS A:118 , ASP A:137 , SER A:138 , TYR A:145 , LEU A:147 , ASN A:150 , GLY A:151 , GLY A:152 , ASN A:153 , TYR A:154 , LYS A:156 , 2M4 A:201 , 2M4 A:202 , K A:204 , K A:205 , K A:206 , HOH A:310 , HOH A:340 , HOH A:364
BINDING SITE FOR RESIDUE 2M4 A 203
4
AC4
SOFTWARE
ASN A:74 , ASN A:112 , ASN A:150 , 2M4 A:201 , 2M4 A:202 , 2M4 A:203
BINDING SITE FOR RESIDUE K A 204
5
AC5
SOFTWARE
2M4 A:201 , 2M4 A:202 , 2M4 A:203 , HOH A:315
BINDING SITE FOR RESIDUE K A 205
6
AC6
SOFTWARE
ASN A:63 , TYR A:64 , ASN A:101 , TYR A:102 , TYR A:116 , TYR A:140 , TYR A:154 , 2M4 A:201 , 2M4 A:202 , 2M4 A:203
BINDING SITE FOR RESIDUE K A 206
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (27 KB)
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