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4DB1
Biol. Unit 1
Info
Asym.Unit (472 KB)
Biol.Unit 1 (236 KB)
Biol.Unit 2 (233 KB)
Biol.Unit 3 (464 KB)
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(1)
Title
:
CARDIAC HUMAN MYOSIN S1DC, BETA ISOFORM COMPLEXED WITH MN-AMPPNP
Authors
:
V. A. Klenchin, J. C. Deacon, A. C. Combs, L. A. Leinwand, I. Rayment
Date
:
13 Jan 12 (Deposition) - 25 Jan 12 (Release) - 25 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
S1Dc, Myosin, Cardiac, Beta Isoform, Myh7, Myhcb, Myhc-Beta, Contractile Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. A. Klenchin, J. C. Deacon, A. C. Combs, L. A. Leinwand, I. Rayment
Cardiac Human Myosin S1Dc, Beta Isoform Complexed With Mn-Amppnp
To Be Published
[
close entry info
]
Hetero Components
(1, 1)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPb)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ANP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
MN
-1
Ligand/Ion
MANGANESE (II) ION
[
close Hetero Component info
]
Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:126 , PRO A:127 , LYS A:129 , TRP A:130 , TYR A:134 , SER A:180 , GLY A:181 , ALA A:182 , GLY A:183 , LYS A:184 , THR A:185 , VAL A:186 , ASN A:238 , SER A:241 , SER A:242 , MN A:802 , HOH A:901 , HOH A:902 , HOH A:921
BINDING SITE FOR RESIDUE ANP A 801
2
AC2
SOFTWARE
THR A:185 , SER A:242 , ANP A:801 , HOH A:901 , HOH A:902
BINDING SITE FOR RESIDUE MN A 802
[
close Site info
]
SAPs(SNPs)/Variants
(95, 95)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_029430 (D3A, chain A, )
02: VAR_004566 (A26V, chain A, )
03: VAR_019845 (V39M, chain A, )
04: VAR_004567 (V59I, chain A, )
05: VAR_017745 (D107E, chain A, )
06: VAR_042762 (Y115H, chain A, )
07: VAR_020797 (T124I, chain A, )
08: VAR_042763 (R143G, chain A, )
09: VAR_004568 (R143Q, chain A, )
10: VAR_029431 (R143W, chain A, )
11: VAR_042764 (K146N, chain A, )
12: VAR_042765 (S148I, chain A, )
13: VAR_020798 (Y162C, chain A, )
14: VAR_042766 (V186L, chain A, )
15: VAR_020799 (N187K, chain A, )
16: VAR_019846 (T188N, chain A, )
17: VAR_020800 (R190T, chain A, )
18: VAR_042767 (A196T, chain A, )
19: VAR_042768 (I201T, chain A, )
20: VAR_019847 (R204H, chain A, )
21: VAR_020801 (Q222K, chain A, )
22: VAR_017746 (A223T, chain A, )
23: VAR_042771 (L227V, chain A, )
24: VAR_019848 (N232S, chain A, )
25: VAR_020802 (F244L, chain A, )
26: VAR_004569 (R249Q, chain A, )
27: VAR_004570 (G256E, chain A, )
28: VAR_042772 (I263M, chain A, )
29: VAR_004571 (I263T, chain A, )
30: VAR_042773 (F312C, chain A, )
31: VAR_020803 (V320M, chain A, )
32: VAR_042774 (E328G, chain A, )
33: VAR_004572 (M349T, chain A, )
34: VAR_042775 (K351E, chain A, )
35: VAR_019849 (A355T, chain A, )
36: VAR_042776 (K383N, chain A, )
37: VAR_042777 (A385V, chain A, )
38: VAR_020804 (L390V, chain A, )
39: VAR_004573 (R403L, chain A, )
40: VAR_004574 (R403Q, chain A, )
41: VAR_004575 (R403W, chain A, )
42: VAR_029432 (V411I, chain A, )
43: VAR_042781 (T412N, chain A, )
44: VAR_042782 (G425R, chain A, )
45: VAR_019850 (A428V, chain A, )
46: VAR_029433 (A430E, chain A, )
47: VAR_042783 (M435T, chain A, )
48: VAR_042784 (V440M, chain A, )
49: VAR_042785 (T441M, chain A, )
50: VAR_019851 (I443T, chain A, )
51: VAR_042786 (K450E, chain A, )
52: VAR_042787 (K450T, chain A, )
53: VAR_004576 (R453C, chain A, )
54: VAR_042788 (R453H, chain A, )
55: VAR_029434 (E466Q, chain A, )
56: VAR_019852 (N479S, chain A, )
57: VAR_019853 (E483K, chain A, )
58: VAR_020806 (E499K, chain A, )
59: VAR_042789 (E500A, chain A, )
60: VAR_042790 (Y501C, chain A, )
61: VAR_042791 (I511F, chain A, )
62: VAR_042792 (I511T, chain A, )
63: VAR_004577 (F513C, chain A, )
64: VAR_042793 (M515R, chain A, )
65: VAR_039562 (M515V, chain A, )
66: VAR_029435 (L517M, chain A, )
67: VAR_017747 (S532P, chain A, )
68: VAR_042794 (A550V, chain A, )
69: VAR_042796 (H576R, chain A, )
70: VAR_004578 (G584R, chain A, )
71: VAR_029436 (G584S, chain A, )
72: VAR_004579 (D587V, chain A, )
73: VAR_020807 (Q595R, chain A, )
74: VAR_020808 (L601V, chain A, )
75: VAR_004580 (N602S, chain A, )
76: VAR_004581 (V606M, chain A, )
77: VAR_004582 (K615N, chain A, )
78: VAR_042797 (K615Q, chain A, )
79: VAR_019854 (M659I, chain A, )
80: VAR_042798 (R663C, chain A, )
81: VAR_019855 (R663H, chain A, )
82: VAR_019856 (R663S, chain A, )
83: VAR_019857 (R671C, chain A, )
84: VAR_020809 (R694C, chain A, )
85: VAR_029437 (R694H, chain A, )
86: VAR_020810 (N696S, chain A, )
87: VAR_042799 (V698A, chain A, )
88: VAR_020811 (R712L, chain A, )
89: VAR_042801 (A742E, chain A, )
90: VAR_014199 (E743D, chain A, )
91: VAR_042802 (V763G, chain A, )
92: VAR_045926 (V763M, chain A, )
93: VAR_017751 (F764L, chain A, )
94: VAR_019859 (G768R, chain A, )
95: VAR_042803 (E774V, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_029430
D
3
A
MYH7_HUMAN
Polymorphism
3729993
A
D
3
A
02
UniProt
VAR_004566
A
26
V
MYH7_HUMAN
Disease (CMH1)
186964570
A
A
26
V
03
UniProt
VAR_019845
V
39
M
MYH7_HUMAN
Disease (CMH1)
---
A
V
39
M
04
UniProt
VAR_004567
V
59
I
MYH7_HUMAN
Disease (CMH1)
---
A
V
59
I
05
UniProt
VAR_017745
D
107
E
MYH7_HUMAN
Polymorphism
2754166
A
D
107
E
06
UniProt
VAR_042762
Y
115
H
MYH7_HUMAN
Disease (CMH1)
---
A
Y
115
H
07
UniProt
VAR_020797
T
124
I
MYH7_HUMAN
Disease (CMH1)
---
A
T
124
I
08
UniProt
VAR_042763
R
143
G
MYH7_HUMAN
Disease (CMH1)
---
A
R
143
G
09
UniProt
VAR_004568
R
143
Q
MYH7_HUMAN
Disease (CMH1)
---
A
R
143
Q
10
UniProt
VAR_029431
R
143
W
MYH7_HUMAN
Disease (CMH1)
---
A
R
143
W
11
UniProt
VAR_042764
K
146
N
MYH7_HUMAN
Disease (CMH1)
---
A
K
146
N
12
UniProt
VAR_042765
S
148
I
MYH7_HUMAN
Disease (CMH1)
---
A
S
148
I
13
UniProt
VAR_020798
Y
162
C
MYH7_HUMAN
Disease (CMH1)
---
A
Y
162
C
14
UniProt
VAR_042766
V
186
L
MYH7_HUMAN
Disease (CMH1)
---
A
V
186
L
15
UniProt
VAR_020799
N
187
K
MYH7_HUMAN
Disease (CMH1)
---
A
N
187
K
16
UniProt
VAR_019846
T
188
N
MYH7_HUMAN
Disease (CMH1)
---
A
T
188
N
17
UniProt
VAR_020800
R
190
T
MYH7_HUMAN
Disease (CMH1)
---
A
R
190
T
18
UniProt
VAR_042767
A
196
T
MYH7_HUMAN
Disease (CMH1)
---
A
A
196
T
19
UniProt
VAR_042768
I
201
T
MYH7_HUMAN
Disease (CMD1S)
---
A
I
201
T
20
UniProt
VAR_019847
R
204
H
MYH7_HUMAN
Disease (CMH1)
---
A
R
204
H
21
UniProt
VAR_020801
Q
222
K
MYH7_HUMAN
Disease (CMH1)
---
A
Q
222
K
22
UniProt
VAR_017746
A
223
T
MYH7_HUMAN
Disease (CMD1S)
---
A
A
223
T
23
UniProt
VAR_042771
L
227
V
MYH7_HUMAN
Disease (CMH1)
---
A
L
227
V
24
UniProt
VAR_019848
N
232
S
MYH7_HUMAN
Disease (CMH1)
---
A
N
232
S
25
UniProt
VAR_020802
F
244
L
MYH7_HUMAN
Disease (CMH1)
---
A
F
244
L
26
UniProt
VAR_004569
R
249
Q
MYH7_HUMAN
Disease (CMH1)
3218713
A
R
249
Q
27
UniProt
VAR_004570
G
256
E
MYH7_HUMAN
Disease (CMH1)
---
A
G
256
E
28
UniProt
VAR_042772
I
263
M
MYH7_HUMAN
Disease (CMH1)
---
A
I
263
M
29
UniProt
VAR_004571
I
263
T
MYH7_HUMAN
Disease (CMH1)
---
A
I
263
T
30
UniProt
VAR_042773
F
312
C
MYH7_HUMAN
Disease (CMH1)
---
A
F
312
C
31
UniProt
VAR_020803
V
320
M
MYH7_HUMAN
Disease (CMH1)
---
A
V
320
M
32
UniProt
VAR_042774
E
328
G
MYH7_HUMAN
Disease (CMH1)
---
A
E
328
G
33
UniProt
VAR_004572
M
349
T
MYH7_HUMAN
Disease (CMH1)
---
A
M
349
T
34
UniProt
VAR_042775
K
351
E
MYH7_HUMAN
Disease (CMH1)
---
A
K
351
E
35
UniProt
VAR_019849
A
355
T
MYH7_HUMAN
Disease (CMH1)
---
A
A
355
T
36
UniProt
VAR_042776
K
383
N
MYH7_HUMAN
Disease (CMH1)
---
A
K
383
N
37
UniProt
VAR_042777
A
385
V
MYH7_HUMAN
Disease (CMH1)
---
A
A
385
V
38
UniProt
VAR_020804
L
390
V
MYH7_HUMAN
Disease (CMH1)
---
A
L
390
V
39
UniProt
VAR_004573
R
403
L
MYH7_HUMAN
Disease (CMH1)
---
A
R
403
L
40
UniProt
VAR_004574
R
403
Q
MYH7_HUMAN
Disease (CMH1)
---
A
R
403
Q
41
UniProt
VAR_004575
R
403
W
MYH7_HUMAN
Disease (CMH1)
3218714
A
R
403
W
42
UniProt
VAR_029432
V
411
I
MYH7_HUMAN
Disease (CMH1)
---
A
V
411
I
43
UniProt
VAR_042781
T
412
N
MYH7_HUMAN
Disease (CMD1S)
---
A
T
412
N
44
UniProt
VAR_042782
G
425
R
MYH7_HUMAN
Disease (CMH1)
---
A
G
425
R
45
UniProt
VAR_019850
A
428
V
MYH7_HUMAN
Disease (CMH1)
---
A
A
428
V
46
UniProt
VAR_029433
A
430
E
MYH7_HUMAN
Disease (CMH1)
---
A
A
430
E
47
UniProt
VAR_042783
M
435
T
MYH7_HUMAN
Disease (CMH1)
---
A
M
435
T
48
UniProt
VAR_042784
V
440
M
MYH7_HUMAN
Disease (CMH1)
---
A
V
440
M
49
UniProt
VAR_042785
T
441
M
MYH7_HUMAN
Disease (MPD1)
---
A
T
441
M
50
UniProt
VAR_019851
I
443
T
MYH7_HUMAN
Disease (CMH1)
---
A
I
443
T
51
UniProt
VAR_042786
K
450
E
MYH7_HUMAN
Disease (CMH1)
---
A
K
450
E
52
UniProt
VAR_042787
K
450
T
MYH7_HUMAN
Disease (CMH1)
---
A
K
450
T
53
UniProt
VAR_004576
R
453
C
MYH7_HUMAN
Disease (CMH1)
---
A
R
453
C
54
UniProt
VAR_042788
R
453
H
MYH7_HUMAN
Disease (CMH1)
---
A
R
453
H
55
UniProt
VAR_029434
E
466
Q
MYH7_HUMAN
Polymorphism
4981473
A
E
466
Q
56
UniProt
VAR_019852
N
479
S
MYH7_HUMAN
Disease (CMH1)
---
A
N
479
S
57
UniProt
VAR_019853
E
483
K
MYH7_HUMAN
Disease (CMH1)
---
A
E
483
K
58
UniProt
VAR_020806
E
499
K
MYH7_HUMAN
Disease (CMH1)
3218715
A
E
499
K
59
UniProt
VAR_042789
E
500
A
MYH7_HUMAN
Disease (CMH1)
---
A
E
500
A
60
UniProt
VAR_042790
Y
501
C
MYH7_HUMAN
Disease (CMH1)
---
A
Y
501
C
61
UniProt
VAR_042791
I
511
F
MYH7_HUMAN
Disease (CMH1)
---
A
I
511
F
62
UniProt
VAR_042792
I
511
T
MYH7_HUMAN
Disease (CMH1)
---
A
I
511
T
63
UniProt
VAR_004577
F
513
C
MYH7_HUMAN
Disease (CMH1)
---
A
F
513
C
64
UniProt
VAR_042793
M
515
R
MYH7_HUMAN
Disease (CMH1)
---
A
M
515
R
65
UniProt
VAR_039562
M
515
V
MYH7_HUMAN
Disease (CMH1)
---
A
M
515
V
66
UniProt
VAR_029435
L
517
M
MYH7_HUMAN
Disease (CMH1)
---
A
L
517
M
67
UniProt
VAR_017747
S
532
P
MYH7_HUMAN
Disease (CMD1S)
---
A
S
532
P
68
UniProt
VAR_042794
A
550
V
MYH7_HUMAN
Disease (CMD1S)
---
A
A
550
V
70
UniProt
VAR_042796
H
576
R
MYH7_HUMAN
Disease (CMH1)
---
A
H
576
R
71
UniProt
VAR_004578
G
584
R
MYH7_HUMAN
Disease (CMH1)
---
A
G
584
R
72
UniProt
VAR_029436
G
584
S
MYH7_HUMAN
Disease (CMH1)
---
A
G
584
S
73
UniProt
VAR_004579
D
587
V
MYH7_HUMAN
Disease (CMH1)
---
A
D
587
V
74
UniProt
VAR_020807
Q
595
R
MYH7_HUMAN
Disease (CMH1)
---
A
Q
595
R
75
UniProt
VAR_020808
L
601
V
MYH7_HUMAN
Disease (CMH1)
---
A
L
601
V
76
UniProt
VAR_004580
N
602
S
MYH7_HUMAN
Disease (CMH1)
---
A
N
602
S
77
UniProt
VAR_004581
V
606
M
MYH7_HUMAN
Disease (CMH1)
---
A
V
606
M
78
UniProt
VAR_004582
K
615
N
MYH7_HUMAN
Disease (CMH1)
---
A
K
615
N
79
UniProt
VAR_042797
K
615
Q
MYH7_HUMAN
Disease (CMH1)
---
A
K
615
Q
80
UniProt
VAR_019854
M
659
I
MYH7_HUMAN
Disease (CMH1)
---
A
M
659
I
81
UniProt
VAR_042798
R
663
C
MYH7_HUMAN
Disease (CMH1)
---
A
R
663
C
82
UniProt
VAR_019855
R
663
H
MYH7_HUMAN
Disease (CMH1)
---
A
R
663
H
83
UniProt
VAR_019856
R
663
S
MYH7_HUMAN
Disease (CMH1)
---
A
R
663
S
84
UniProt
VAR_019857
R
671
C
MYH7_HUMAN
Disease (CMH1)
---
A
R
671
C
85
UniProt
VAR_020809
R
694
C
MYH7_HUMAN
Disease (CMH1)
---
A
R
694
C
86
UniProt
VAR_029437
R
694
H
MYH7_HUMAN
Disease (CMH1)
---
A
R
694
H
87
UniProt
VAR_020810
N
696
S
MYH7_HUMAN
Disease (CMH1)
---
A
N
696
S
88
UniProt
VAR_042799
V
698
A
MYH7_HUMAN
Disease (CMH1)
---
A
V
698
A
89
UniProt
VAR_020811
R
712
L
MYH7_HUMAN
Disease (CMH1)
---
A
R
712
L
90
UniProt
VAR_042801
A
742
E
MYH7_HUMAN
Disease (CMH1)
---
A
A
742
E
91
UniProt
VAR_014199
E
743
D
MYH7_HUMAN
Disease (CMH1)
---
A
E
743
D
92
UniProt
VAR_042802
V
763
G
MYH7_HUMAN
Disease (CMH1)
---
A
V
763
G
93
UniProt
VAR_045926
V
763
M
MYH7_HUMAN
Disease (CMH1)
---
A
V
763
M
94
UniProt
VAR_017751
F
764
L
MYH7_HUMAN
Disease (CMD1S)
---
A
F
764
L
95
UniProt
VAR_019859
G
768
R
MYH7_HUMAN
Disease (CMH1)
---
A
G
768
R
96
UniProt
VAR_042803
E
774
V
MYH7_HUMAN
Disease (CMH1)
---
A
E
774
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
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1: MYOSIN_MOTOR (A:85-777)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MYOSIN_MOTOR
PS51456
Myosin motor domain profile.
MYH7_HUMAN
85-778
1
A:85-777
-
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Exons
(0, 0)
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SCOP Domains
(2, 4)
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1a: SCOP_d4db1a2 (A:34-77)
1b: SCOP_d4db1b2 (B:34-77)
2a: SCOP_d4db1a1 (A:1-33,A:78-777)
2b: SCOP_d4db1b1 (B:1-33,B:78-775)
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Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
Myosin S1 fragment, N-terminal domain
(42)
Family
:
automated matches
(4)
Protein domain
:
automated matches
(4)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d4db1a2
A:34-77
1b
d4db1b2
B:34-77
Class
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Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Motor proteins
(119)
Protein domain
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automated matches
(40)
Human (Homo sapiens) [TaxId: 9606]
(31)
2a
d4db1a1
A:1-33,A:78-777
2b
d4db1b1
B:1-33,B:78-775
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CATH Domains
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Pfam Domains
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