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4D43
Biol. Unit 2
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Asym.Unit (728 KB)
Biol.Unit 1 (357 KB)
Biol.Unit 2 (356 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF S. AUREUS FABI IN COMPLEX WITH NADP AND 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL
Authors
:
J. Schiebel, A. Chang, P. J. Tonge, C. A. Sotriffer, C. Kisker
Date
:
26 Oct 14 (Deposition) - 04 Mar 15 (Release) - 15 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: E,F,G,H (1x)
Biol. Unit 2: A,B,C,D (1x)
Keywords
:
Short-Chain Dehydrogenase/Reductase Superfamily, Fatty Acid Biosynthesis, Lipid Synthesis, Safabi, Fabi, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Schiebel, A. Chang, B. Merget, G. R. Bommineni, W. Yu, L. A. Spagnuolo, M. V. Baxter, M. Tareilus, P. J. Tonge, C. Kisker, C. A. Sotriffer
An Ordered Water Channel In Staphylococcus Aureus Fabi: Unraveling The Mechanism Of Substrate Recognition And Reduction.
Biochemistry V. 54 1943 2015
[
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7a)
1b: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7b)
1c: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7c)
1d: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7d)
1e: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7e)
1f: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7f)
1g: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7g)
1h: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7h)
2a: GLUTAMIC ACID (GLUa)
2b: GLUTAMIC ACID (GLUb)
2c: GLUTAMIC ACID (GLUc)
2d: GLUTAMIC ACID (GLUd)
2e: GLUTAMIC ACID (GLUe)
2f: GLUTAMIC ACID (GLUf)
3a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
3b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
3c: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDc)
3d: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDd)
3e: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDe)
3f: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDf)
3g: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDg)
3h: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDh)
3i: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDi)
4a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
4b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
4c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
4d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
4e: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPe)
4f: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPf)
4g: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPg)
4h: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
9W7
4
Ligand/Ion
2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL
2
GLU
3
Mod. Amino Acid
GLUTAMIC ACID
3
MRD
4
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
4
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
[
close Hetero Component info
]
Sites
(16, 16)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC3 (SOFTWARE)
03: AC4 (SOFTWARE)
04: AC5 (SOFTWARE)
05: AC6 (SOFTWARE)
06: AC7 (SOFTWARE)
07: AC8 (SOFTWARE)
08: AC9 (SOFTWARE)
09: BC1 (SOFTWARE)
10: BC2 (SOFTWARE)
11: BC3 (SOFTWARE)
12: BC4 (SOFTWARE)
13: BC5 (SOFTWARE)
14: BC6 (SOFTWARE)
15: CC6 (SOFTWARE)
16: DC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
LYS A:7 , ASP A:88 , GLY A:140 , ASN A:182 , ARG A:184 , LEU A:234 , SER A:235 , ASP A:236 , HOH A:2083 , HOH A:2180
BINDING SITE FOR RESIDUE MRD A1257
02
AC3
SOFTWARE
GLY A:203 , PHE A:204 , ASN A:205 , HOH A:2160 , LYS E:199
BINDING SITE FOR RESIDUE GLU A1260
03
AC4
SOFTWARE
GLY A:13 , ILE A:14 , ALA A:15 , SER A:19 , ILE A:20 , ARG A:40 , LYS A:41 , SER A:44 , ILE A:65 , ASP A:66 , VAL A:67 , SER A:93 , ILE A:94 , ALA A:95 , ILE A:120 , THR A:145 , THR A:146 , TYR A:147 , LYS A:164 , ALA A:190 , GLY A:191 , PRO A:192 , ILE A:193 , THR A:195 , SER A:197 , 9W7 A:1259 , HOH A:2008 , HOH A:2009 , HOH A:2011 , HOH A:2012 , HOH A:2191
BINDING SITE FOR RESIDUE NAP A1258
04
AC5
SOFTWARE
ALA A:95 , PHE A:96 , ALA A:97 , LEU A:102 , TYR A:157 , MET A:160 , SER A:197 , ALA A:198 , PHE A:204 , NAP A:1258
BINDING SITE FOR RESIDUE 9W7 A1259
05
AC6
SOFTWARE
LYS B:7 , ASP B:88 , GLY B:140 , ASN B:182 , ARG B:184 , LEU B:234 , SER B:235 , ASP B:236 , HOH B:2021 , HOH B:2125 , HOH B:2220
BINDING SITE FOR RESIDUE MRD B1257
06
AC7
SOFTWARE
ARG B:103 , GLY B:202 , GLY B:203 , ASN B:205 , HOH B:2137 , HOH B:2193 , HOH B:2196 , HOH B:2197
BINDING SITE FOR RESIDUE GLU B1260
07
AC8
SOFTWARE
GLY B:13 , ILE B:14 , ALA B:15 , SER B:19 , ILE B:20 , ARG B:40 , LYS B:41 , SER B:44 , ILE B:65 , ASP B:66 , VAL B:67 , SER B:93 , ILE B:94 , ALA B:95 , ILE B:120 , THR B:145 , THR B:146 , TYR B:147 , LYS B:164 , ALA B:190 , GLY B:191 , PRO B:192 , ILE B:193 , THR B:195 , SER B:197 , 9W7 B:1259 , HOH B:2028 , HOH B:2029 , HOH B:2033 , HOH B:2034
BINDING SITE FOR RESIDUE NAP B1258
08
AC9
SOFTWARE
ALA B:95 , PHE B:96 , ALA B:97 , LEU B:102 , TYR B:147 , TYR B:157 , MET B:160 , SER B:197 , ALA B:198 , PHE B:204 , NAP B:1258
BINDING SITE FOR RESIDUE 9W7 B1259
09
BC1
SOFTWARE
LYS C:7 , ASP C:88 , GLY C:140 , ASN C:182 , ARG C:184 , LEU C:234 , HOH C:2210
BINDING SITE FOR RESIDUE MRD C1257
10
BC2
SOFTWARE
ARG C:103 , GLY C:202 , GLY C:203 , PHE C:204 , ASN C:205
BINDING SITE FOR RESIDUE GLU C1260
11
BC3
SOFTWARE
GLY C:13 , ILE C:14 , ALA C:15 , SER C:19 , ILE C:20 , ARG C:40 , LYS C:41 , SER C:44 , ILE C:65 , ASP C:66 , VAL C:67 , SER C:93 , ILE C:94 , ALA C:95 , ILE C:120 , THR C:145 , THR C:146 , TYR C:147 , LYS C:164 , ALA C:190 , GLY C:191 , PRO C:192 , ILE C:193 , THR C:195 , SER C:197 , 9W7 C:1259 , HOH C:2020 , HOH C:2021 , HOH C:2022 , HOH C:2024 , GLU F:100
BINDING SITE FOR RESIDUE NAP C1258
12
BC4
SOFTWARE
ALA C:95 , PHE C:96 , ALA C:97 , LEU C:102 , TYR C:147 , TYR C:157 , MET C:160 , SER C:197 , ALA C:198 , PHE C:204 , NAP C:1258
BINDING SITE FOR RESIDUE 9W7 C1259
13
BC5
SOFTWARE
GLY D:13 , ILE D:14 , ALA D:15 , SER D:19 , ILE D:20 , ARG D:40 , LYS D:41 , SER D:44 , ILE D:65 , ASP D:66 , VAL D:67 , SER D:93 , ILE D:94 , ALA D:95 , ILE D:120 , THR D:145 , THR D:146 , TYR D:147 , LYS D:164 , ALA D:190 , GLY D:191 , PRO D:192 , ILE D:193 , THR D:195 , SER D:197 , 9W7 D:1258 , HOH D:2010 , HOH D:2011 , HOH D:2012 , HOH D:2013 , HOH D:2116
BINDING SITE FOR RESIDUE NAP D1257
14
BC6
SOFTWARE
ALA D:95 , PHE D:96 , ALA D:97 , LEU D:102 , TYR D:147 , TYR D:157 , MET D:160 , SER D:197 , ALA D:198 , PHE D:204 , NAP D:1257
BINDING SITE FOR RESIDUE 9W7 D1258
15
CC6
SOFTWARE
LYS D:7 , ASP D:88 , GLY D:140 , ASN D:182 , ARG D:184 , LEU D:234 , SER D:235 , ASP D:236 , HOH D:2067
BINDING SITE FOR RESIDUE MRD D1259
16
DC1
SOFTWARE
GLU B:100 , GLY G:13 , ILE G:14 , ALA G:15 , SER G:19 , ILE G:20 , ARG G:40 , LYS G:41 , SER G:44 , ILE G:65 , ASP G:66 , VAL G:67 , SER G:93 , ILE G:94 , ALA G:95 , ILE G:120 , THR G:145 , THR G:146 , TYR G:147 , LYS G:164 , ALA G:190 , GLY G:191 , PRO G:192 , ILE G:193 , THR G:195 , SER G:197 , 9W7 G:1260 , HOH G:2030 , HOH G:2031 , HOH G:2032 , HOH G:2034
BINDING SITE FOR RESIDUE NAP G1259
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