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4D43
Biol. Unit 1
Info
Asym.Unit (728 KB)
Biol.Unit 1 (357 KB)
Biol.Unit 2 (356 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF S. AUREUS FABI IN COMPLEX WITH NADP AND 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL
Authors
:
J. Schiebel, A. Chang, P. J. Tonge, C. A. Sotriffer, C. Kisker
Date
:
26 Oct 14 (Deposition) - 04 Mar 15 (Release) - 15 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: E,F,G,H (1x)
Biol. Unit 2: A,B,C,D (1x)
Keywords
:
Short-Chain Dehydrogenase/Reductase Superfamily, Fatty Acid Biosynthesis, Lipid Synthesis, Safabi, Fabi, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Schiebel, A. Chang, B. Merget, G. R. Bommineni, W. Yu, L. A. Spagnuolo, M. V. Baxter, M. Tareilus, P. J. Tonge, C. Kisker, C. A. Sotriffer
An Ordered Water Channel In Staphylococcus Aureus Fabi: Unraveling The Mechanism Of Substrate Recognition And Reduction.
Biochemistry V. 54 1943 2015
[
close entry info
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Hetero Components
(4, 16)
Info
All Hetero Components
1a: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7a)
1b: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7b)
1c: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7c)
1d: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7d)
1e: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7e)
1f: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7f)
1g: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7g)
1h: 2-(2-CHLORO-4-NITROPHENOXY)-5-ETHY... (9W7h)
2a: GLUTAMIC ACID (GLUa)
2b: GLUTAMIC ACID (GLUb)
2c: GLUTAMIC ACID (GLUc)
2d: GLUTAMIC ACID (GLUd)
2e: GLUTAMIC ACID (GLUe)
2f: GLUTAMIC ACID (GLUf)
3a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
3b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
3c: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDc)
3d: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDd)
3e: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDe)
3f: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDf)
3g: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDg)
3h: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDh)
3i: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDi)
4a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
4b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
4c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
4d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
4e: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPe)
4f: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPf)
4g: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPg)
4h: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
9W7
4
Ligand/Ion
2-(2-CHLORO-4-NITROPHENOXY)-5-ETHYL-4-FLUOROPHENOL
2
GLU
3
Mod. Amino Acid
GLUTAMIC ACID
3
MRD
5
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
4
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
[
close Hetero Component info
]
Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC3 (SOFTWARE)
03: BC3 (SOFTWARE)
04: BC7 (SOFTWARE)
05: BC8 (SOFTWARE)
06: BC9 (SOFTWARE)
07: CC1 (SOFTWARE)
08: CC2 (SOFTWARE)
09: CC3 (SOFTWARE)
10: CC4 (SOFTWARE)
11: CC5 (SOFTWARE)
12: CC7 (SOFTWARE)
13: CC8 (SOFTWARE)
14: CC9 (SOFTWARE)
15: DC1 (SOFTWARE)
16: DC2 (SOFTWARE)
17: DC3 (SOFTWARE)
18: DC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY H:13 , ILE H:14 , ALA H:15 , SER H:19 , ILE H:20 , ARG H:40 , LYS H:41 , ILE H:65 , ASP H:66 , VAL H:67 , SER H:93 , ILE H:94 , ALA H:95 , ILE H:120 , THR H:145 , THR H:146 , TYR H:147 , LYS H:164 , ALA H:190 , GLY H:191 , PRO H:192 , ILE H:193 , THR H:195 , SER H:197 , 9W7 H:1259 , HOH H:2011 , HOH H:2012 , HOH H:2013 , HOH H:2015 , HOH H:2033 , HOH H:2133
BINDING SITE FOR RESIDUE NAP H1257
02
AC3
SOFTWARE
GLY A:203 , PHE A:204 , ASN A:205 , HOH A:2160 , LYS E:199
BINDING SITE FOR RESIDUE GLU A1260
03
BC3
SOFTWARE
GLY C:13 , ILE C:14 , ALA C:15 , SER C:19 , ILE C:20 , ARG C:40 , LYS C:41 , SER C:44 , ILE C:65 , ASP C:66 , VAL C:67 , SER C:93 , ILE C:94 , ALA C:95 , ILE C:120 , THR C:145 , THR C:146 , TYR C:147 , LYS C:164 , ALA C:190 , GLY C:191 , PRO C:192 , ILE C:193 , THR C:195 , SER C:197 , 9W7 C:1259 , HOH C:2020 , HOH C:2021 , HOH C:2022 , HOH C:2024 , GLU F:100
BINDING SITE FOR RESIDUE NAP C1258
04
BC7
SOFTWARE
ASP E:88 , GLY E:140 , ASN E:182 , ARG E:184 , LEU E:234 , SER E:235 , ASP E:236
BINDING SITE FOR RESIDUE MRD E1257
05
BC8
SOFTWARE
ARG E:103 , GLY E:203 , PHE E:204 , ASN E:205 , HOH E:2138
BINDING SITE FOR RESIDUE GLU E1260
06
BC9
SOFTWARE
GLY E:13 , ILE E:14 , ALA E:15 , SER E:19 , ILE E:20 , ARG E:40 , LYS E:41 , SER E:44 , ILE E:65 , ASP E:66 , VAL E:67 , SER E:93 , ILE E:94 , ALA E:95 , ILE E:120 , THR E:145 , THR E:146 , TYR E:147 , LYS E:164 , ALA E:190 , GLY E:191 , PRO E:192 , ILE E:193 , THR E:195 , SER E:197 , 9W7 E:1259 , HOH E:2007 , HOH E:2008 , HOH E:2009 , HOH E:2010 , HOH E:2070 , HOH E:2172
BINDING SITE FOR RESIDUE NAP E1258
07
CC1
SOFTWARE
ALA E:95 , PHE E:96 , ALA E:97 , LEU E:102 , TYR E:147 , TYR E:157 , MET E:160 , SER E:197 , ALA E:198 , PHE E:204 , NAP E:1258
BINDING SITE FOR RESIDUE 9W7 E1259
08
CC2
SOFTWARE
LYS F:7 , ASP F:88 , GLY F:139 , GLY F:140 , ASN F:182 , ARG F:184 , HOH F:2191
BINDING SITE FOR RESIDUE MRD F1257
09
CC3
SOFTWARE
ARG F:103 , GLY F:203 , ASN F:205 , HOH F:2117 , HOH F:2164 , HOH F:2200
BINDING SITE FOR RESIDUE GLU F1260
10
CC4
SOFTWARE
GLY F:13 , ILE F:14 , ALA F:15 , SER F:19 , ILE F:20 , ARG F:40 , LYS F:41 , SER F:44 , ILE F:65 , ASP F:66 , VAL F:67 , SER F:93 , ILE F:94 , ALA F:95 , ILE F:120 , THR F:145 , THR F:146 , TYR F:147 , LYS F:164 , ALA F:190 , GLY F:191 , PRO F:192 , ILE F:193 , THR F:195 , SER F:197 , 9W7 F:1259 , HOH F:2015 , HOH F:2016 , HOH F:2019 , HOH F:2022
BINDING SITE FOR RESIDUE NAP F1258
11
CC5
SOFTWARE
ALA F:95 , PHE F:96 , ALA F:97 , LEU F:102 , TYR F:147 , TYR F:157 , SER F:197 , ALA F:198 , PHE F:204 , NAP F:1258
BINDING SITE FOR RESIDUE 9W7 F1259
12
CC7
SOFTWARE
GLN G:155 , ASN G:156 , GLY G:203 , THR G:206 , GLU G:210
BINDING SITE FOR RESIDUE MRD G1258
13
CC8
SOFTWARE
LYS G:7 , ASP G:88 , GLY G:140 , ASN G:182 , ARG G:184 , HOH G:2017 , HOH G:2179
BINDING SITE FOR RESIDUE MRD G1257
14
CC9
SOFTWARE
ARG G:103 , GLY G:202 , GLY G:203 , PHE G:204 , ASN G:205
BINDING SITE FOR RESIDUE GLU G1261
15
DC1
SOFTWARE
GLU B:100 , GLY G:13 , ILE G:14 , ALA G:15 , SER G:19 , ILE G:20 , ARG G:40 , LYS G:41 , SER G:44 , ILE G:65 , ASP G:66 , VAL G:67 , SER G:93 , ILE G:94 , ALA G:95 , ILE G:120 , THR G:145 , THR G:146 , TYR G:147 , LYS G:164 , ALA G:190 , GLY G:191 , PRO G:192 , ILE G:193 , THR G:195 , SER G:197 , 9W7 G:1260 , HOH G:2030 , HOH G:2031 , HOH G:2032 , HOH G:2034
BINDING SITE FOR RESIDUE NAP G1259
16
DC2
SOFTWARE
ALA G:95 , PHE G:96 , ALA G:97 , LEU G:102 , TYR G:147 , TYR G:157 , MET G:160 , SER G:197 , ALA G:198 , PHE G:204 , NAP G:1259
BINDING SITE FOR RESIDUE 9W7 G1260
17
DC3
SOFTWARE
LYS H:7 , ASP H:88 , GLY H:140 , ASN H:182 , ARG H:184 , LEU H:234 , SER H:235 , ASP H:236 , HOH H:2127
BINDING SITE FOR RESIDUE MRD H1258
18
DC4
SOFTWARE
ALA H:95 , PHE H:96 , ALA H:97 , LEU H:102 , TYR H:147 , TYR H:157 , MET H:160 , SER H:197 , ALA H:198 , PHE H:204 , NAP H:1257
BINDING SITE FOR RESIDUE 9W7 H1259
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