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4D01
Asym. Unit
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Asym.Unit (86 KB)
Biol.Unit 1 (80 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE HUMAN ALPHA9 NICOTINIC ACETYLCHOLINE RECEPTOR
Authors
:
P. Giastas, M. Zouridakis, E. Zarkadas, S. J. Tzartos
Date
:
23 Apr 14 (Deposition) - 01 Oct 14 (Release) - 19 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Signaling Protein, Ligand Binding Domain, Cys-Loop Receptor
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Zouridakis, P. Giastas, E. Zarkadas, D. Chroni-Tzartou, P. Bregestovski, S. J. Tzartos
Crystal Structures Of Free And Antagonist-Bound States Of Human Alpha9 Nicotinic Receptor Extracellular Domain
Nat. Struct. Mol. Biol. V. 21 976 2014
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
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No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:55 , HOH A:2201
BINDING SITE FOR RESIDUE EDO A1218
2
AC2
SOFTWARE
ASN A:96 , ASN A:145 , THR A:147 , NAG A:1217 , HOH A:2187 , HOH A:2202 , HOH A:2203
BINDING SITE FOR RESIDUE EDO A1219
3
AC3
SOFTWARE
TYR A:199 , HOH A:2204 , HOH A:2205
BINDING SITE FOR RESIDUE EDO A1220
4
AC4
SOFTWARE
HOH A:2125
BINDING SITE FOR RESIDUE EDO A1221
5
AC5
SOFTWARE
VAL A:30 , ASN A:32 , ARG A:48 , HOH A:2041
BINDING SITE FOR MONO-SACCHARIDE NAG A1216 BOUND TO ASN A 32
6
AC6
SOFTWARE
GLN A:143 , ASN A:145 , VAL A:186 , ASN A:188 , THR A:203 , THR A:205 , EDO A:1219 , HOH A:2176 , HOH A:2187 , HOH A:2198 , HOH A:2200
BINDING SITE FOR MONO-SACCHARIDE NAG A1217 BOUND TO ASN A 145
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_031151 (R71Q, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_031151
R
96
Q
ACHA9_HUMAN
Polymorphism
10024518
A
R
71
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: NEUROTR_ION_CHANNEL (A:130-144)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NEUROTR_ION_CHANNEL
PS00236
Neurotransmitter-gated ion-channels signature.
ACHA9_HUMAN
155-169
1
A:130-144
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Exons
(0, 0)
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SCOP Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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