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4CYW
Asym. Unit
Info
Asym.Unit (516 KB)
Biol.Unit 1 (507 KB)
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(1)
Title
:
STRUCTURE OF THE A_MALLARD_SWEDEN_51_2002 H10 AVIAN HAEMMAGLUTININ IN COMPLEX WITH HUMAN RECEPTOR ANALOG 6-SLN
Authors
:
S. G. Vachieri, X. Xiong, P. J. Collins, P. A. Walker, S. R. Martin, L. F. H J. W. Mccauley, S. J. Gamblin, J. J. Skehel
Date
:
15 Apr 14 (Deposition) - 11 Jun 14 (Release) - 30 Jul 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. G. Vachieri, X. Xiong, P. J. Collins, P. A. Walker, S. R. Martin, L. F. Haire, Y. Zhang, J. W. Mccauley, S. J. Gamblin, J. J. Skehel
Receptor Binding By H10 Influenza Viruses.
Nature V. 511 475 2014
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Hetero Components
(5, 29)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
1d: BETA-D-MANNOSE (BMAd)
2a: BETA-D-GALACTOSE (GALa)
2b: BETA-D-GALACTOSE (GALb)
2c: BETA-D-GALACTOSE (GALc)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
3c: ALPHA-D-MANNOSE (MANc)
3d: ALPHA-D-MANNOSE (MANd)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
4i: N-ACETYL-D-GLUCOSAMINE (NAGi)
4j: N-ACETYL-D-GLUCOSAMINE (NAGj)
4k: N-ACETYL-D-GLUCOSAMINE (NAGk)
4l: N-ACETYL-D-GLUCOSAMINE (NAGl)
4m: N-ACETYL-D-GLUCOSAMINE (NAGm)
4n: N-ACETYL-D-GLUCOSAMINE (NAGn)
4o: N-ACETYL-D-GLUCOSAMINE (NAGo)
5a: O-SIALIC ACID (SIAa)
5b: O-SIALIC ACID (SIAb)
5c: O-SIALIC ACID (SIAc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BMA
4
Ligand/Ion
BETA-D-MANNOSE
2
GAL
3
Ligand/Ion
BETA-D-GALACTOSE
3
MAN
4
Ligand/Ion
ALPHA-D-MANNOSE
4
NAG
15
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
SIA
3
Ligand/Ion
O-SIALIC ACID
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:38
BINDING SITE FOR MONO-SACCHARIDE NAG A 420 BOUND TO ASN A 38
02
AC2
SOFTWARE
THR A:167 , ASN A:242 , HOH A:2031 , HOH A:2035 , HOH A:2048 , GLN E:222
BINDING SITE FOR MONO-SACCHARIDE NAG A 401 BOUND TO ASN A 242
03
AC3
SOFTWARE
ARG A:300 , HIS B:75 , ASN B:79 , ASN B:82 , GLU C:114 , ARG C:264
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG B 201 THROUGH MAN B 207 BOUND TO ASN B 82
04
AC4
SOFTWARE
ASN C:38 , ALA C:39 , THR C:318
BINDING SITE FOR MONO-SACCHARIDE NAG C 420 BOUND TO ASN C 38
05
AC5
SOFTWARE
ARG C:169 , GLY C:240 , ASN C:242
BINDING SITE FOR MONO-SACCHARIDE NAG C 401 BOUND TO ASN C 242
06
AC6
SOFTWARE
HIS D:75 , ASN D:79 , ASN D:82 , GLU E:114
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG D 201 THROUGH MAN D 207 BOUND TO ASN D 82
07
AC7
SOFTWARE
ASN E:38 , THR E:40 , THR E:318
BINDING SITE FOR MONO-SACCHARIDE NAG E 420 BOUND TO ASN E 38
08
AC8
SOFTWARE
ARG E:169 , GLY E:240 , ASP E:241 , ASN E:242
BINDING SITE FOR MONO-SACCHARIDE NAG E 401 BOUND TO ASN E 242
09
AC9
SOFTWARE
GLU A:114 , HOH A:2027 , HIS F:75 , ASN F:79 , ASN F:82 , HOH F:2023
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG F 201 THROUGH MAN F 204 BOUND TO ASN F 82
10
BC1
SOFTWARE
TYR A:98 , GLY A:134 , THR A:135 , THR A:136 , LYS A:137 , TRP A:153 , HIS A:183 , GLU A:190 , GLN A:222 , GLY A:225 , GLN A:226
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA A 701 THROUGH NAG A 703
11
BC2
SOFTWARE
TYR A:98 , GLY A:134 , THR A:135 , THR A:136 , LYS A:137 , TRP A:153 , HIS A:183 , GLU A:190 , GLN A:222 , GLY A:225 , GLN A:226 , TYR C:98 , THR C:135 , THR C:136 , LYS C:137 , HIS C:183 , GLU C:190 , GLN C:222 , GLY C:225 , GLN C:226 , GLY C:228 , HOH C:2033
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA C 701 THROUGH NAG C 703
12
BC3
SOFTWARE
TYR C:98 , THR C:135 , THR C:136 , LYS C:137 , HIS C:183 , GLU C:190 , GLN C:222 , GLY C:225 , GLN C:226 , GLY C:228 , HOH C:2033 , TYR E:98 , GLY E:134 , THR E:135 , THR E:136 , LYS E:137 , TRP E:153 , HIS E:183 , GLU E:190 , GLN E:222 , GLY E:225 , GLN E:226
BINDING SITE FOR POLY-SACCHARIDE RESIDUES SIA E 701 THROUGH NAG E 703
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (516 KB)
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