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4CVB
Biol. Unit 2
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Asym.Unit (190 KB)
Biol.Unit 1 (184 KB)
Biol.Unit 2 (365 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF QUINONE-DEPENDENT ALCOHOL DEHYDROGENASE FROM PSEUDOGLUCONOBACTER SACCHAROKETOGENENES
Authors
:
H. J. Rozeboom, S. Yu, R. Mikkelsen, I. Nikolaev, H. Mulder, B. W. Dijkst
Date
:
25 Mar 14 (Deposition) - 25 Mar 15 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.72
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Oxidoreductase, Carbohydrate Oxidation, Quinoprotein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. J. Rozeboom, S. Yu, R. Mikkelsen, I. Nikolaev, H. J. Mulder, B. W. Dijkstra
Crystal Structure Of Quinone-Dependent Alcohol Dehydrogenas From Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols And Carbohydrates.
Protein Sci. V. 24 2044 2015
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: CHLORIDE ION (CLa)
3a: PROPANOIC ACID (PPIa)
4a: PYRROLOQUINOLINE QUINONE (PQQa)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
5c: ZINC ION (ZNc)
5d: ZINC ION (ZNd)
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No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
PPI
2
Ligand/Ion
PROPANOIC ACID
4
PQQ
2
Ligand/Ion
PYRROLOQUINOLINE QUINONE
5
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:220 , ASP A:333 , GLU A:335 , TYR A:476 , PQQ A:1608
BINDING SITE FOR RESIDUE CA A 1607
2
AC2
SOFTWARE
GLU A:106 , LEU A:153 , ARG A:158 , SER A:203 , THR A:218 , GLN A:220 , TRP A:270 , ASP A:333 , GLU A:335 , LYS A:378 , PHE A:434 , ASP A:439 , TRP A:440 , TYR A:515 , CA A:1607 , HOH A:2117 , HOH A:2200 , HOH A:2290 , HOH A:2363
BINDING SITE FOR RESIDUE PQQ A 1608
3
AC3
SOFTWARE
HIS A:324 , PPI A:1614 , HOH A:2409 , HOH A:2410 , HOH A:2415
BINDING SITE FOR RESIDUE ZN A 1609
4
AC4
SOFTWARE
GLU A:300 , ASP A:350 , GLU A:503 , HOH A:2438
BINDING SITE FOR RESIDUE ZN A 1610
5
AC5
SOFTWARE
ASP A:57 , GLU A:262 , CL A:1613 , HOH A:2012
BINDING SITE FOR RESIDUE ZN A 1611
6
AC6
SOFTWARE
ASP A:534 , GLU A:545 , SER A:548 , HOH A:2583 , HOH A:2584 , HOH A:2592
BINDING SITE FOR RESIDUE ZN A 1612
7
AC7
SOFTWARE
ASP A:57 , ASN A:62 , ASN A:65 , ASN A:113 , ZN A:1611
BINDING SITE FOR RESIDUE CL A 1613
8
AC8
SOFTWARE
HIS A:324 , THR A:410 , ZN A:1609 , HOH A:2409 , HOH A:2410 , HOH A:2415 , HOH A:2487
BINDING SITE FOR RESIDUE PPI A 1614
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SAPs(SNPs)/Variants
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (190 KB)
Header - Asym.Unit
Biol.Unit 1 (184 KB)
Header - Biol.Unit 1
Biol.Unit 2 (365 KB)
Header - Biol.Unit 2
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