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4CUR
Asym. Unit
Info
Asym.Unit (49 KB)
Biol.Unit 1 (86 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN BAZ2B IN COMPLEX WITH FRAGMENT-3 N09555
Authors
:
A. R. Bradley, Y. Liu, T. Krojer, C. Bountra, C. H. Arrowsmith, A. Edward S. Knapp, F. Von Delft
Date
:
21 Mar 14 (Deposition) - 02 Apr 14 (Release) - 02 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.84
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. R Bradley, Y. Liu, T. Krojer, C. Bountra, C. H. Arrowsmith, A. Edwards, S. Knapp, F. Von Delft
Crystal Structure Of Human Baz2B In Complex With Fragment-3 N09553
To Be Published
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
2a: 2-(HYDROXYMETHYL)-6-METHYLPYRIDIN-... (LA7a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
LA7
1
Ligand/Ion
2-(HYDROXYMETHYL)-6-METHYLPYRIDIN-3-OL
[
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]
Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:1879 , THR A:1968 , HOH A:2039 , HOH A:2119
BINDING SITE FOR RESIDUE EDO A2971
2
AC2
SOFTWARE
PRO A:1888 , PHE A:1943 , ASN A:1944 , HOH A:2059
BINDING SITE FOR RESIDUE LA7 A2972
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: BROMODOMAIN_2 (A:1881-1951)
2: BROMODOMAIN_1 (A:1886-1943)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BROMODOMAIN_2
PS50014
Bromodomain profile.
BAZ2B_HUMAN
2077-2147
1
A:1881-1951
2
BROMODOMAIN_1
PS00633
Bromodomain signature.
BAZ2B_HUMAN
2082-2139
1
A:1886-1943
[
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Exons
(3, 3)
Info
All Exons
Exon 1.40b (A:1856-1874 (gaps))
Exon 1.41 (A:1874-1922)
Exon 1.42 (A:1922-1970)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.39/1.40b
2: Boundary 1.40b/1.41
3: Boundary 1.41/1.42
4: Boundary 1.42/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000392783
1a
ENSE00001893988
chr2:
160473203-160472753
451
BAZ2B_HUMAN
-
0
0
-
-
1.3a
ENST00000392783
3a
ENSE00001386868
chr2:
160412376-160412334
43
BAZ2B_HUMAN
-
0
0
-
-
1.5
ENST00000392783
5
ENSE00002146728
chr2:
160335232-160335086
147
BAZ2B_HUMAN
1-49
49
0
-
-
1.7
ENST00000392783
7
ENSE00001740643
chr2:
160310312-160310124
189
BAZ2B_HUMAN
49-112
64
0
-
-
1.8b
ENST00000392783
8b
ENSE00001680744
chr2:
160304920-160304753
168
BAZ2B_HUMAN
112-168
57
0
-
-
1.9
ENST00000392783
9
ENSE00001656854
chr2:
160303486-160303293
194
BAZ2B_HUMAN
168-232
65
0
-
-
1.10a
ENST00000392783
10a
ENSE00001009654
chr2:
160295723-160295520
204
BAZ2B_HUMAN
233-300
68
0
-
-
1.10c
ENST00000392783
10c
ENSE00000840721
chr2:
160295206-160294814
393
BAZ2B_HUMAN
301-431
131
0
-
-
1.11b
ENST00000392783
11b
ENSE00000840720
chr2:
160289874-160289268
607
BAZ2B_HUMAN
432-634
203
0
-
-
1.12
ENST00000392783
12
ENSE00000840719
chr2:
160287667-160287374
294
BAZ2B_HUMAN
634-732
99
0
-
-
1.13
ENST00000392783
13
ENSE00000840718
chr2:
160285771-160285711
61
BAZ2B_HUMAN
732-752
21
0
-
-
1.14
ENST00000392783
14
ENSE00000840717
chr2:
160284930-160284822
109
BAZ2B_HUMAN
752-788
37
0
-
-
1.15
ENST00000392783
15
ENSE00000840716
chr2:
160284553-160284452
102
BAZ2B_HUMAN
789-822
34
0
-
-
1.17b
ENST00000392783
17b
ENSE00000840715
chr2:
160269056-160268846
211
BAZ2B_HUMAN
823-893
71
0
-
-
1.18
ENST00000392783
18
ENSE00000840714
chr2:
160261625-160261533
93
BAZ2B_HUMAN
893-924
32
0
-
-
1.19a
ENST00000392783
19a
ENSE00001173508
chr2:
160261421-160261360
62
BAZ2B_HUMAN
924-944
21
0
-
-
1.20a
ENST00000392783
20a
ENSE00000840712
chr2:
160257175-160257110
66
BAZ2B_HUMAN
945-966
22
0
-
-
1.21
ENST00000392783
21
ENSE00000840711
chr2:
160255405-160255340
66
BAZ2B_HUMAN
967-988
22
0
-
-
1.22
ENST00000392783
22
ENSE00000840710
chr2:
160253900-160253856
45
BAZ2B_HUMAN
989-1003
15
0
-
-
1.24
ENST00000392783
24
ENSE00000840709
chr2:
160252345-160252280
66
BAZ2B_HUMAN
1004-1025
22
0
-
-
1.26
ENST00000392783
26
ENSE00000840708
chr2:
160245996-160245856
141
BAZ2B_HUMAN
1026-1072
47
0
-
-
1.27b
ENST00000392783
27b
ENSE00000840707
chr2:
160243118-160242864
255
BAZ2B_HUMAN
1073-1157
85
0
-
-
1.28b
ENST00000392783
28b
ENSE00000840706
chr2:
160241880-160241666
215
BAZ2B_HUMAN
1158-1229
72
0
-
-
1.29
ENST00000392783
29
ENSE00001173601
chr2:
160240191-160240117
75
BAZ2B_HUMAN
1229-1254
26
0
-
-
1.30
ENST00000392783
30
ENSE00001173595
chr2:
160239313-160239070
244
BAZ2B_HUMAN
1254-1335
82
0
-
-
1.31
ENST00000392783
31
ENSE00000840703
chr2:
160231264-160231202
63
BAZ2B_HUMAN
1336-1356
21
0
-
-
1.32
ENST00000392783
32
ENSE00001148127
chr2:
160229700-160229556
145
BAZ2B_HUMAN
1357-1405
49
0
-
-
1.33
ENST00000392783
33
ENSE00001173562
chr2:
160206868-160206219
650
BAZ2B_HUMAN
1405-1621
217
0
-
-
1.34
ENST00000392783
34
ENSE00000840700
chr2:
160205791-160205518
274
BAZ2B_HUMAN
1622-1713
92
0
-
-
1.35
ENST00000392783
35
ENSE00001173555
chr2:
160205344-160205189
156
BAZ2B_HUMAN
1713-1765
53
0
-
-
1.36a
ENST00000392783
36a
ENSE00001173549
chr2:
160204157-160203997
161
BAZ2B_HUMAN
1765-1818
54
0
-
-
1.37a
ENST00000392783
37a
ENSE00000840697
chr2:
160194283-160194078
206
BAZ2B_HUMAN
1819-1887
69
0
-
-
1.38b
ENST00000392783
38b
ENSE00001173542
chr2:
160193588-160193453
136
BAZ2B_HUMAN
1887-1932
46
0
-
-
1.39
ENST00000392783
39
ENSE00000840695
chr2:
160189197-160189051
147
BAZ2B_HUMAN
1933-1981
49
0
-
-
1.40b
ENST00000392783
40b
ENSE00000840694
chr2:
160182429-160182164
266
BAZ2B_HUMAN
1982-2070
89
1
A:1856-1874 (gaps)
24
1.41
ENST00000392783
41
ENSE00001173525
chr2:
160181465-160181322
144
BAZ2B_HUMAN
2070-2118
49
1
A:1874-1922
49
1.42
ENST00000392783
42
ENSE00001148115
chr2:
160176929-160175490
1440
BAZ2B_HUMAN
2118-2168
51
1
A:1922-1970
49
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4cura_ (A:)
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
Bromodomain-like
(339)
Superfamily
:
Bromodomain
(203)
Family
:
automated matches
(169)
Protein domain
:
automated matches
(169)
Human (Homo sapiens) [TaxId: 9606]
(162)
1a
d4cura_
A:
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CATH Domains
(0, 0)
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all CATH domains
View:
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Pfam Domains
(0, 0)
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