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4CQV
Asym. Unit
Info
Asym.Unit (516 KB)
Biol.Unit 1 (504 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF H5 (TYTY) DEL133/ILE155THR MUTANT HAEMAGGLUTININ
Authors
:
X. Xiong, H. Xiao, S. R. Martin, P. J. Coombs, J. Liu, P. J. Collins, S. G. V P. A. Walker, Y. P. Lin, J. W. Mccauley, S. J. Gamblin, J. J. Skehel
Date
:
21 Feb 14 (Deposition) - 28 May 14 (Release) - 11 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.86
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Viral Protein, Sialic Acid, Glycoprotein, Virus Receptor, Avian Flu, Sialyllactosamine, 3Sln, 3'Sln, 6Sln, 6'Sln, Lsta
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Xiong, H. Xiao, S. R. Martin, P. J. Coombs, J. Liu, P. J. Collins, S. G. Vachieri, P. A. Walker, Y. P. Lin, J. W. Mccauley, S. J. Gamblin, J. J. Skehel
Enhanced Human Receptor Binding By H5 Haemagglutinins.
Virology V. 456 179 2014
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Hetero Components
(2, 14)
Info
All Hetero Components
1a: N-ACETYL-D-GLUCOSAMINE (NAGa)
1b: N-ACETYL-D-GLUCOSAMINE (NAGb)
1c: N-ACETYL-D-GLUCOSAMINE (NAGc)
1d: N-ACETYL-D-GLUCOSAMINE (NAGd)
1e: N-ACETYL-D-GLUCOSAMINE (NAGe)
1f: N-ACETYL-D-GLUCOSAMINE (NAGf)
1g: N-ACETYL-D-GLUCOSAMINE (NAGg)
1h: N-ACETYL-D-GLUCOSAMINE (NAGh)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
2c: PHOSPHATE ION (PO4c)
2d: PHOSPHATE ION (PO4d)
2e: PHOSPHATE ION (PO4e)
2f: PHOSPHATE ION (PO4f)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NAG
8
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
2
PO4
6
Ligand/Ion
PHOSPHATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:131 , SER A:132 , GLN A:221
BINDING SITE FOR RESIDUE PO4 A1321
02
AC2
SOFTWARE
VAL C:130 , SER C:131 , SER C:132 , SER C:140 , GLN C:221
BINDING SITE FOR RESIDUE PO4 C1321
03
AC3
SOFTWARE
SER C:106 , ILE C:263 , HOH C:2020 , HOH C:2042 , GLY D:67 , ARG D:68 , GLU D:69
BINDING SITE FOR RESIDUE PO4 C1322
04
AC4
SOFTWARE
SER E:132 , GLN E:221 , HOH E:2041
BINDING SITE FOR RESIDUE PO4 E1321
05
AC5
SOFTWARE
SER E:121 , TRP E:122 , SER E:123 , ASP E:124 , HIS E:125
BINDING SITE FOR RESIDUE PO4 E1322
06
AC6
SOFTWARE
TRP A:122 , SER A:123 , ASP A:124 , HIS A:125 , HOH A:2043
BINDING SITE FOR RESIDUE PO4 A1322
07
AC7
SOFTWARE
ASN A:11
BINDING SITE FOR MONO-SACCHARIDE NAG A1011 BOUND TO ASN A 11
08
AC8
SOFTWARE
ASN A:23
BINDING SITE FOR MONO-SACCHARIDE NAG A1023 BOUND TO ASN A 23
09
AC9
SOFTWARE
ASN A:164 , ASN A:235 , ALA A:237 , HOH A:2063 , SER E:216
BINDING SITE FOR MONO-SACCHARIDE NAG A1164 BOUND TO ASN A 164
10
BC1
SOFTWARE
ASN C:11 , HOH C:2041
BINDING SITE FOR MONO-SACCHARIDE NAG C1011 BOUND TO ASN C 11
11
BC2
SOFTWARE
ASN C:23
BINDING SITE FOR MONO-SACCHARIDE NAG C1023 BOUND TO ASN C 23
12
BC3
SOFTWARE
SER A:216 , ASN C:164 , ASN C:235
BINDING SITE FOR MONO-SACCHARIDE NAG C1164 BOUND TO ASN C 164
13
BC4
SOFTWARE
GLN E:15 , ASN E:23 , HOH E:2066
BINDING SITE FOR MONO-SACCHARIDE NAG E1023 BOUND TO ASN E 23
14
BC5
SOFTWARE
SER C:216 , ASN E:164 , ASN E:235 , HOH E:2067
BINDING SITE FOR MONO-SACCHARIDE NAG E1164 BOUND TO ASN E 164
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (516 KB)
Header - Asym.Unit
Biol.Unit 1 (504 KB)
Header - Biol.Unit 1
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