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4CPU
Asym. Unit
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Asym.Unit (44 KB)
Biol.Unit 1 (39 KB)
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(1)
Title
:
MACROCYCLIC TRANSITION-STATE MIMICKING HIV-1 PROTEASE INHIBITORS ENCOMPASSING A TERTIARY ALCOHOL
Authors
:
M. Derosa, J. Unge, H. V. Motwani, A. Rosenquist, L. Vrang, H. Wallberg,
Date
:
08 Feb 14 (Deposition) - 17 Dec 14 (Release) - 17 Dec 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.82
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hydrolase, Hiv-1 Protease, Inhibitor, Rational Drug Design
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Reference
:
M. De Rosa, J. Unge, H. V. Motwani, A. Rosenquist, L. Vrang, H. Wallberg, M. Larhed
Synthesis Of P1'-Functionalized Macrocyclic Transition- State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol.
J. Med. Chem. V. 57 6444 2014
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: METHYL N-[(2S)-1-[2-[[4-[(3S)-3,4-... (V78a)
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No.
Name
Count
Type
Full Name
1
CL
3
Ligand/Ion
CHLORIDE ION
2
V78
1
Ligand/Ion
METHYL N-[(2S)-1-[2-[[4-[(3S)-3,4-DIHYDROTHIOPHEN-3-YL]PHENYL]METHYL]-2-[3-[(3Z,8S,11R)-11-OXIDANYL-7,10-BIS(OXIDANYLIDENE)-8-PROPAN-2-YL-6,9-DIAZABICYCLO[11.2.2]HEPTADECA-1(16),3,13(17),14-TETRAEN-11-YL]PROPYL]HYDRAZINYL]-3,3-DIMETHYL-1-OXIDANYLIDENE-BUTAN-2-YL]CARBAMATE
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Sites
(4, 4)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP B:106
BINDING SITE FOR RESIDUE CL B1200
2
AC2
SOFTWARE
THR A:74 , ASN A:88 , HOH A:2129 , ARG B:141
BINDING SITE FOR RESIDUE CL A1100
3
AC3
SOFTWARE
THR B:174 , ASN B:188 , HOH B:2109
BINDING SITE FOR RESIDUE CL B1201
4
AC4
SOFTWARE
ARG A:8 , ASP A:25 , GLY A:27 , ALA A:28 , ASP A:29 , GLY A:48 , GLY A:49 , ILE A:50 , PRO A:81 , HOH A:2091 , LEU B:123 , ASP B:125 , GLY B:127 , ALA B:128 , ASP B:129 , GLY B:148 , GLY B:149 , ILE B:150 , PHE B:153 , PRO B:181 , HOH B:2085
BINDING SITE FOR RESIDUE V78 B1202
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 4)
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All PROSITE Patterns/Profiles
1: ASP_PROT_RETROV (A:20-89,B:120-189)
2: ASP_PROTEASE (A:22-33,B:122-133)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ASP_PROT_RETROV
PS50175
Aspartyl protease, retroviral-type family profile.
POL_HV1B1
520-589
2
A:20-89
B:120-189
2
ASP_PROTEASE
PS00141
Eukaryotic and viral aspartyl proteases active site.
POL_HV1B1
522-533
2
A:22-33
B:122-133
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Asymmetric Unit 1
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