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4CFR
Asym. Unit
Info
Asym.Unit (136 KB)
Biol.Unit 1 (130 KB)
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(1)
Title
:
CA-BOUND S100A4 C3S, C81S, C86S AND F45W MUTANT COMPLEXED WITH NON-MUSCLE MYOSIN IIA
Authors
:
A. Duelli, B. Kiss, I. Lundholm, A. Bodor, L. Radnai, M. Petoukhov, D. Sv L. Nyitray, G. Katona
Date
:
19 Nov 13 (Deposition) - 07 May 14 (Release) - 28 May 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,B,Q
Biol. Unit 1: A,B,Q (1x)
Keywords
:
Ca-Binding Protein-Motor Protein Complex, Ca-Binding, Ef-Hand
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. Duelli, B. Kiss, I. Lundholm, A. Bodor, L. Radnai, M. Petoukhov, D. Svergun, L. Nyitray, G. Katona
The C-Terminal Random Coil Region Tunes The Ca2+-Binding Affinity Of S100A4 Through Conformational Activation.
Plos One V. 9 97654 2014
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
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No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:20 , GLU A:23 , ASP A:25 , LYS A:28 , GLU A:33 , HOH A:2046
BINDING SITE FOR RESIDUE CA A1096
2
AC2
SOFTWARE
ASP A:63 , ASN A:65 , ASP A:67 , GLU A:69 , GLU A:74 , HOH A:2105
BINDING SITE FOR RESIDUE CA A1097
3
AC3
SOFTWARE
SER B:20 , GLU B:23 , ASP B:25 , LYS B:28 , GLU B:33 , HOH B:2031
BINDING SITE FOR RESIDUE CA B1101
4
AC4
SOFTWARE
ASP B:63 , ASN B:65 , ASP B:67 , GLU B:69 , GLU B:74 , HOH B:2036
BINDING SITE FOR RESIDUE CA B1102
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:50-85,B:50-85)
2: S100_CABP (A:58-79,B:58-79)
3: EF_HAND_1 (A:63-75,B:63-75)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
S10A4_HUMAN
50-85
2
A:50-85
B:50-85
2
S100_CABP
PS00303
S-100/ICaBP type calcium binding protein signature.
S10A4_HUMAN
58-79
2
A:58-79
B:58-79
3
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
S10A4_HUMAN
63-75
2
A:63-75
B:63-75
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Exons
(2, 4)
Info
All Exons
Exon 1.4c (A:2-47 | B:1-47)
Exon 1.5c (A:48-95 | B:48-100)
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All Exon Boundaries
1: Boundary 1.2a/1.4c
2: Boundary 1.4c/1.5c
3: Boundary 1.5c/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000368716
2a
ENSE00001928713
chr1:
153518361-153518229
133
S10A4_HUMAN
-
0
0
-
-
1.4c
ENST00000368716
4c
ENSE00002173615
chr1:
153517285-153517130
156
S10A4_HUMAN
1-47
47
2
A:2-47
B:1-47
46
47
1.5c
ENST00000368716
5c
ENSE00001447832
chr1:
153516399-153516089
311
S10A4_HUMAN
48-101
54
2
A:48-95
B:48-100
48
53
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (136 KB)
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