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4CDP
Asym. Unit
Info
Asym.Unit (137 KB)
Biol.Unit 1 (131 KB)
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(1)
Title
:
IMPROVED COORDINATES FOR ESCHERICHIA COLI O157:H7 HEME DEGRADING ENZYME CHUS.
Authors
:
M. D. L. Suits, N. Jaffer, Z. Jia
Date
:
05 Nov 13 (Deposition) - 13 Nov 13 (Release) - 13 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Heme Degradation, Structural Repeat, Montreal- Kingston Bacterial Structural Genomics Initiative, Bsgi, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. D. Suits, N. Jaffer, Z. Jia
Structure Of The Escherichia Coli O157:H7 Heme Oxygenase Chus In Complex With Heme And Enzymatic Inactivation By Mutation Of The Heme Coordinating Residue His-193.
J. Biol. Chem. V. 281 36776 2006
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
2a: FORMIC ACID (FMTa)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
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No.
Name
Count
Type
Full Name
1
EDO
12
Ligand/Ion
1,2-ETHANEDIOL
2
FMT
1
Ligand/Ion
FORMIC ACID
3
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:100 , MET A:241 , ILE A:252 , HEM A:402 , HOH A:2170
BINDING SITE FOR RESIDUE FMT A 401
02
AC2
SOFTWARE
ALA A:88 , LEU A:90 , ARG A:100 , PHE A:102 , VAL A:192 , HIS A:193 , ARG A:206 , PHE A:243 , LYS A:291 , VAL A:298 , GLN A:313 , TYR A:315 , ARG A:318 , FMT A:401 , HOH A:2256 , HOH A:2274 , HOH A:2364 , HOH A:2370
BINDING SITE FOR RESIDUE HEM A 402
03
AC3
SOFTWARE
GLN A:194 , THR A:197 , LEU A:198 , ARG A:201 , HOH A:2248
BINDING SITE FOR RESIDUE EDO A1338
04
AC4
SOFTWARE
ALA A:23 , GLY A:24 , ASN A:27 , ILE A:28 , ARG A:29 , HOH A:2045 , HOH A:2051
BINDING SITE FOR RESIDUE EDO A1339
05
AC5
SOFTWARE
ARG A:6 , LEU A:25 , ASN A:27 , GLN A:82 , HIS A:83 , LEU A:84 , ASN A:85 , HOH A:2154
BINDING SITE FOR RESIDUE EDO A1340
06
AC6
SOFTWARE
ILE A:65 , ARG A:67 , LEU A:135 , LYS A:136 , HOH A:2034 , HOH A:2126 , HOH A:2127 , HOH A:2208
BINDING SITE FOR RESIDUE EDO A1341
07
AC7
SOFTWARE
HIS A:111 , LYS A:113 , HOH A:2189 , HOH A:2391 , HOH A:2392
BINDING SITE FOR RESIDUE EDO A1342
08
AC8
SOFTWARE
LEU A:217 , ARG A:290 , PRO A:292 , TYR A:297 , HOH A:2251
BINDING SITE FOR RESIDUE EDO A1343
09
AC9
SOFTWARE
ARG A:95 , SER A:222 , PHE A:253 , THR A:254 , GLY A:255 , HOH A:2320 , HOH A:2393
BINDING SITE FOR RESIDUE EDO A1344
10
BC1
SOFTWARE
HIS A:277
BINDING SITE FOR RESIDUE EDO A1345
11
BC2
SOFTWARE
PHE A:210 , ASN A:211 , VAL A:213 , ASP A:215 , ALA A:218 , TRP A:287 , HOH A:2286
BINDING SITE FOR RESIDUE EDO A1346
12
BC3
SOFTWARE
SER A:232 , ASP A:236 , GLN A:327 , SER A:334
BINDING SITE FOR RESIDUE EDO A1347
13
BC4
SOFTWARE
GLU A:74 , THR A:273 , PHE A:274 , THR A:275
BINDING SITE FOR RESIDUE EDO A1348
14
BC5
SOFTWARE
LYS A:63 , ILE A:65 , ARG A:121 , HOH A:2210 , HOH A:2394
BINDING SITE FOR RESIDUE EDO A1349
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4cdpa_ (A:)
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Protein Domains
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Organisms
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(
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Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Heme iron utilization protein-like
(8)
Superfamily
:
Heme iron utilization protein-like
(8)
Family
:
HemS/ChuS-like
(4)
Protein domain
:
Heme oxygenase ChuS
(2)
Escherichia coli O157:H7 [TaxId: 83334]
(2)
1a
d4cdpa_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (137 KB)
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