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4CD1
Asym. Unit
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Asym.Unit (145 KB)
Biol.Unit 1 (138 KB)
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(1)
Title
:
RNNTPDASE2 IN COMPLEX WITH PSB-071
Authors
:
M. Zebisch, P. Schaefer, N. Straeter
Date
:
29 Oct 13 (Deposition) - 12 Feb 14 (Release) - 12 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Apyrase, Atpase, Purinergic Signalling, Cd39, Drug Design, Inhibitor, Ntpdase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Zebisch, Y. Baqi, P. Schafer, C. E. Muller, N. Strater
Crystal Structure Of Ntpdase2 In Complex With The Sulfoanthraquinone Inhibitor Psb-071.
J. Struct. Biol. V. 185 336 2014
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: 1-AMINO-4-(3-METHYLPHENYL)AMINO-9,... (8E9a)
1b: 1-AMINO-4-(3-METHYLPHENYL)AMINO-9,... (8E9b)
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No.
Name
Count
Type
Full Name
1
8E9
2
Ligand/Ion
1-AMINO-4-(3-METHYLPHENYL)AMINO-9,10-DIOXO-9,10-DIHYDROANTHRACENE-2-SULFONATE
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Sites
(2, 2)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:50 , ARG A:245 , LEU A:249 , LYS A:392 , THR A:393 , ARG A:394 , TYR A:398 , 8E9 A:1453
BINDING SITE FOR RESIDUE 8E9 A1452
2
AC2
SOFTWARE
SER A:52 , ASP A:76 , ARG A:245 , SER A:346 , TYR A:350 , TYR A:398 , 8E9 A:1452
BINDING SITE FOR RESIDUE 8E9 A1453
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
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1: GDA1_CD39_NTPASE (A:160-175)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GDA1_CD39_NTPASE
PS01238
GDA1/CD39 family of nucleoside phosphatases signature.
ENTP2_RAT
160-175
1
A:160-175
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d4cd1a1 (A:38-178)
2a: SCOP_d4cd1a2 (A:179-451)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
automated matches
(111)
Protein domain
:
automated matches
(111)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(6)
1a
d4cd1a1
A:38-178
Family
:
NTPDase (Nucleoside triphosphate diphosphohydrolase)-like
(10)
Protein domain
:
automated matches
(6)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(6)
2a
d4cd1a2
A:179-451
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CATH Domains
(0, 0)
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Pfam Domains
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Chain A
Asymmetric Unit 1
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