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4C7D
Biol. Unit 2
Info
Asym.Unit (186 KB)
Biol.Unit 1 (91 KB)
Biol.Unit 2 (94 KB)
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(1)
Title
:
STRUCTURE AND ACTIVITY OF THE GH20 BETA-N-ACETYLHEXOSAMINIDASE FROM STREPTOMYCES COELICOLOR A3(2)
Authors
:
N. Nguyen Thi, W. A. Offen, G. J. Davies, N. Doucet
Date
:
20 Sep 13 (Deposition) - 12 Mar 14 (Release) - 09 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Nguyen Thi, W. A. Offen, F. Shareck, G. J. Davies, N. Doucet
Structure And Activity Of The Streptomyces Coelicolor A3(2) Beta-N-Acetylhexosaminidase Provides Further Insight Into Gh20 Family Catalysis And Inhibition.
Biochemistry V. 53 1789 2014
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Hetero Components
(1, 13)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
1u: 1,2-ETHANEDIOL (EDOu)
1v: 1,2-ETHANEDIOL (EDOv)
View:
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No.
Name
Count
Type
Full Name
1
EDO
13
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(14, 14)
Info
All Sites
01: AC9 (SOFTWARE)
02: BC1 (SOFTWARE)
03: BC2 (SOFTWARE)
04: BC3 (SOFTWARE)
05: BC4 (SOFTWARE)
06: BC5 (SOFTWARE)
07: BC6 (SOFTWARE)
08: BC7 (SOFTWARE)
09: BC8 (SOFTWARE)
10: BC9 (SOFTWARE)
11: CC1 (SOFTWARE)
12: CC2 (SOFTWARE)
13: CC3 (SOFTWARE)
14: CC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC9
SOFTWARE
ARG A:138 , TYR A:139 , VAL A:422 , ALA B:1 , GLU B:2 , HOH B:2002 , HOH B:2005
BINDING SITE FOR RESIDUE EDO A1503
02
BC1
SOFTWARE
VAL B:271 , TYR B:277 , ALA B:313 , ARG B:317
BINDING SITE FOR RESIDUE EDO B1495
03
BC2
SOFTWARE
GLU B:80 , ALA B:140 , LYS B:172 , ARG B:294 , HOH B:2464
BINDING SITE FOR RESIDUE EDO B1496
04
BC3
SOFTWARE
ASP B:352 , LYS B:359 , TYR B:413 , PRO B:415 , HOH B:2355
BINDING SITE FOR RESIDUE EDO B1497
05
BC4
SOFTWARE
HIS B:226 , GLU B:228 , HOH B:2217 , HOH B:2266 , HOH B:2267 , HOH B:2465
BINDING SITE FOR RESIDUE EDO B1498
06
BC5
SOFTWARE
ARG B:150 , TYR B:381 , ASP B:383 , TRP B:396 , TRP B:430 , GLU B:432 , HOH B:2190
BINDING SITE FOR RESIDUE EDO B1499
07
BC6
SOFTWARE
ARG B:220 , TYR B:221 , SER B:224 , ARG B:225 , HOH B:2208 , HOH B:2466
BINDING SITE FOR RESIDUE EDO B1500
08
BC7
SOFTWARE
ARG B:403 , HOH B:2447 , HOH B:2467
BINDING SITE FOR RESIDUE EDO B1501
09
BC8
SOFTWARE
PRO B:13 , ALA B:14 , SER B:15 , VAL B:16 , HOH B:2016 , HOH B:2023 , HOH B:2027
BINDING SITE FOR RESIDUE EDO B1502
10
BC9
SOFTWARE
ASP B:156 , ARG B:160 , ASP B:163 , TYR B:221
BINDING SITE FOR RESIDUE EDO B1503
11
CC1
SOFTWARE
SER B:224 , HOH B:2061 , HOH B:2268 , HOH B:2466
BINDING SITE FOR RESIDUE EDO B1504
12
CC2
SOFTWARE
ASN B:240 , PRO B:257 , TYR B:259 , HOH B:2297 , HOH B:2470
BINDING SITE FOR RESIDUE EDO B1505
13
CC3
SOFTWARE
ALA B:303 , HIS B:304
BINDING SITE FOR RESIDUE EDO B1506
14
CC4
SOFTWARE
VAL B:264 , TRP B:396
BINDING SITE FOR RESIDUE EDO B1507
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d4c7da1 (A:2-138)
1b: SCOP_d4c7db1 (B:1-138)
2a: SCOP_d4c7da2 (A:139-494)
2b: SCOP_d4c7db2 (B:139-494)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
beta-N-acetylhexosaminidase-like domain
(54)
Family
:
automated matches
(9)
Protein domain
:
automated matches
(9)
Streptomyces coelicolor [TaxId: 1902]
(3)
1a
d4c7da1
A:2-138
1b
d4c7db1
B:1-138
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
beta-N-acetylhexosaminidase catalytic domain
(22)
Protein domain
:
automated matches
(3)
Streptomyces coelicolor [TaxId: 1902]
(3)
2a
d4c7da2
A:139-494
2b
d4c7db2
B:139-494
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CATH Domains
(0, 0)
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (186 KB)
Header - Asym.Unit
Biol.Unit 1 (91 KB)
Header - Biol.Unit 1
Biol.Unit 2 (94 KB)
Header - Biol.Unit 2
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