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4C6Y
Biol. Unit 2
Info
Asym.Unit (281 KB)
Biol.Unit 1 (139 KB)
Biol.Unit 2 (135 KB)
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Title
:
ANCESTRAL PNCA (LAST COMMON ANCESTORS OF GRAM-POSITIVE AND GRAM-NEGATIVE BACTERIA) BETA-LACTAMASE CLASS A
Authors
:
J. A. Gavira, V. A. Risso, J. M. Sanchez-Ruiz
Date
:
19 Sep 13 (Deposition) - 16 Apr 14 (Release) - 28 May 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Antibiotic Resistance
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. A. Risso, J. A. Gavira, E. A. Gaucher, J. M. Sanchez-Ruiz
Phenotypic Comparisons Of Consensus Variants Versus Laboratory Resurrections Of Precambrian Proteins.
Proteins V. 82 887 2014
(for further references see the
PDB file header
)
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CHLORIDE ION (CLa)
3a: GLYCEROL (GOLa)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
5b: DI(HYDROXYETHYL)ETHER (PEGb)
5c: DI(HYDROXYETHYL)ETHER (PEGc)
5d: DI(HYDROXYETHYL)ETHER (PEGd)
5e: DI(HYDROXYETHYL)ETHER (PEGe)
5f: DI(HYDROXYETHYL)ETHER (PEGf)
5g: DI(HYDROXYETHYL)ETHER (PEGg)
5h: DI(HYDROXYETHYL)ETHER (PEGh)
5i: DI(HYDROXYETHYL)ETHER (PEGi)
5j: DI(HYDROXYETHYL)ETHER (PEGj)
5k: DI(HYDROXYETHYL)ETHER (PEGk)
5l: DI(HYDROXYETHYL)ETHER (PEGl)
5m: DI(HYDROXYETHYL)ETHER (PEGm)
5n: DI(HYDROXYETHYL)ETHER (PEGn)
5o: DI(HYDROXYETHYL)ETHER (PEGo)
5p: DI(HYDROXYETHYL)ETHER (PEGp)
5q: DI(HYDROXYETHYL)ETHER (PEGq)
5r: DI(HYDROXYETHYL)ETHER (PEGr)
5s: DI(HYDROXYETHYL)ETHER (PEGs)
5t: DI(HYDROXYETHYL)ETHER (PEGt)
5u: DI(HYDROXYETHYL)ETHER (PEGu)
6a: TETRAETHYLENE GLYCOL (PG4a)
6b: TETRAETHYLENE GLYCOL (PG4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
GOL
-1
Ligand/Ion
GLYCEROL
4
NA
-1
Ligand/Ion
SODIUM ION
5
PEG
8
Ligand/Ion
DI(HYDROXYETHYL)ETHER
6
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
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Sites
(12, 12)
Info
All Sites
01: BC4 (SOFTWARE)
02: CC1 (SOFTWARE)
03: CC2 (SOFTWARE)
04: CC3 (SOFTWARE)
05: CC4 (SOFTWARE)
06: CC5 (SOFTWARE)
07: CC6 (SOFTWARE)
08: CC7 (SOFTWARE)
09: CC8 (SOFTWARE)
10: CC9 (SOFTWARE)
11: DC1 (SOFTWARE)
12: DC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
BC4
SOFTWARE
ARG A:94 , GLY A:116 , GLU A:121 , GLU B:31 , GLU B:35
BINDING SITE FOR RESIDUE PEG A 303
02
CC1
SOFTWARE
HOH A:2200 , VAL B:48 , ARG B:56 , ILE B:57 , ARG B:184 , ALA B:188 , HOH B:2069 , HOH B:2093
BINDING SITE FOR RESIDUE PEG B 291
03
CC2
SOFTWARE
ALA A:257 , ARG B:65 , HOH B:2065
BINDING SITE FOR RESIDUE CL B 292
04
CC3
SOFTWARE
SER B:70 , TYR B:105 , SER B:130 , ASN B:132 , THR B:235 , GLY B:236 , THR B:237
BINDING SITE FOR RESIDUE PEG B 293
05
CC4
SOFTWARE
GLU B:140 , TRP B:165 , HOH B:2041
BINDING SITE FOR RESIDUE PEG B 294
06
CC5
SOFTWARE
ASP B:163 , ARG B:164 , TRP B:165 , GLU B:168 , HOH B:2060
BINDING SITE FOR RESIDUE PEG B 295
07
CC6
SOFTWARE
LEU B:212 , ASN B:214 , LYS B:215 , ASP B:218
BINDING SITE FOR RESIDUE PEG B 296
08
CC7
SOFTWARE
LYS A:111 , HIS A:112 , LYS B:38
BINDING SITE FOR RESIDUE PEG B 297
09
CC8
SOFTWARE
LEU B:142 , ALA B:147 , SER B:154 , HOH B:2023
BINDING SITE FOR RESIDUE PEG B 298
10
CC9
SOFTWARE
ASP B:85 , LYS B:111 , SER B:203 , GLN B:206
BINDING SITE FOR RESIDUE PEG B 299
11
DC1
SOFTWARE
THR A:53 , ARG A:55 , ARG B:161
BINDING SITE FOR RESIDUE ACT B 300
12
DC2
SOFTWARE
LYS B:219
BINDING SITE FOR RESIDUE PG4 B 301
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (281 KB)
Header - Asym.Unit
Biol.Unit 1 (139 KB)
Header - Biol.Unit 1
Biol.Unit 2 (135 KB)
Header - Biol.Unit 2
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