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4C6X
Biol. Unit 1
Info
Asym.Unit (281 KB)
Biol.Unit 1 (271 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF M. TUBERCULOSIS C171Q KASA IN COMPLEX WITH THIOLACTOMYCIN (TLM)
Authors
:
J. Schiebel, K. Kapilashrami, A. Fekete, G. R. Bommineni, C. M. Schaefe M. J. Mueller, P. J. Tonge, C. Kisker
Date
:
19 Sep 13 (Deposition) - 09 Oct 13 (Release) - 11 Dec 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Transferase, Kasa, Kas Enzyme, Condensing Enzyme, Type 2 Fatty Acid Biosynthesis, Mycolic Acid Synthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Schiebel, K. Kapilashrami, A. Fekete, G. R. Bommineni, C. M. Schaefer, M. J. Mueller, P. J. Tonge, C. Kisker
Structural Basis For The Recognition Of Mycolic Acid Precursors By Kasa, A Condensing Enzyme And Drug Target From Mycobacterium Tuberculosis
J. Biol. Chem. V. 288 34190 2013
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Hetero Components
(4, 6)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
2a: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEa)
3a: POTASSIUM ION (Ka)
3b: POTASSIUM ION (Kb)
4a: (2R)-2-(HEXADECANOYLOXY)-3-{[(10R)... (M7Ua)
4b: (2R)-2-(HEXADECANOYLOXY)-3-{[(10R)... (M7Ub)
5a: THIOLACTOMYCIN (TLMa)
5b: THIOLACTOMYCIN (TLMb)
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No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
EPE
1
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINEETHANESULFONIC ACID
3
K
-1
Ligand/Ion
POTASSIUM ION
4
M7U
2
Ligand/Ion
(2R)-2-(HEXADECANOYLOXY)-3-{[(10R)-10-METHYLOCTADECANOYL]OXY}PROPYL PHOSPHATE
5
TLM
2
Ligand/Ion
THIOLACTOMYCIN
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:219 , ASP A:233 , HOH A:2279
BINDING SITE FOR RESIDUE EDO A1417
2
AC2
SOFTWARE
ASN B:309 , ALA B:310 , HIS B:311 , GLU B:354 , ASN B:399 , ASN B:400
BINDING SITE FOR RESIDUE K B1417
3
AC3
SOFTWARE
ASN A:309 , ALA A:310 , HIS A:311 , GLU A:354 , ASN A:399 , ASN A:400
BINDING SITE FOR RESIDUE K A1418
4
AC4
SOFTWARE
GLN A:171 , VAL A:278 , ALA A:279 , PRO A:280 , HIS A:311 , THR A:313 , HIS A:345 , PHE A:402 , GLY A:403 , PHE A:404 , GLY A:406 , HOH A:2243 , HOH A:2322 , HOH A:2438
BINDING SITE FOR RESIDUE TLM A1419
5
AC5
SOFTWARE
GLN B:171 , PHE B:237 , VAL B:278 , ALA B:279 , PRO B:280 , HIS B:311 , THR B:313 , HIS B:345 , PHE B:402 , GLY B:403 , PHE B:404 , GLY B:406 , HOH B:2264 , HOH B:2315
BINDING SITE FOR RESIDUE TLM B1418
6
AC6
SOFTWARE
GLY A:115 , GLU A:120 , ALA A:170 , GLU A:199 , GLY A:200 , PRO A:201 , ILE A:202 , GLU A:203 , LEU A:205 , ALA A:209 , PHE A:239 , GLY A:240 , GLU A:241 , HIS A:345 , HOH A:2439 , ILE B:145
BINDING SITE FOR RESIDUE M7U A1420
7
AC7
SOFTWARE
ILE A:145 , GLY B:115 , GLU B:120 , ALA B:170 , GLU B:199 , GLY B:200 , PRO B:201 , GLU B:203 , ALA B:209 , PHE B:239 , GLY B:240 , HIS B:345 , ILE B:347 , HOH B:2316 , HOH B:2317
BINDING SITE FOR RESIDUE M7U B1419
8
AC8
SOFTWARE
ASP A:332 , GLN A:333 , ASP A:381 , LEU A:382 , ASP A:383 , HOH A:2381 , HOH A:2386 , HOH A:2401 , HOH A:2440 , HOH A:2441 , HOH A:2442 , ARG B:78 , ARG B:79 , LYS B:136 , HOH B:2163
BINDING SITE FOR RESIDUE EPE A1421
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4c6xa1 (A:2-259)
1b: SCOP_d4c6xa2 (A:260-416)
1c: SCOP_d4c6xb1 (B:2-259)
1d: SCOP_d4c6xb2 (B:260-416)
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Mycobacterium tuberculosis [TaxId: 83332]
(9)
1a
d4c6xa1
A:2-259
1b
d4c6xa2
A:260-416
1c
d4c6xb1
B:2-259
1d
d4c6xb2
B:260-416
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (281 KB)
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Biol.Unit 1 (271 KB)
Header - Biol.Unit 1
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