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Getting 'Exon' information from database.
4C2O
Asym. Unit
Info
Asym.Unit (203 KB)
Biol.Unit 1 (197 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN TESTIS ANGIOTENSIN-I CONVERTING ENZYME MUTANT D465T
Authors
:
G. Masuyer, C. J. Yates, S. L. U. Schwager, A. Mohd, E. D. Sturrock, K. R. A
Date
:
19 Aug 13 (Deposition) - 11 Dec 13 (Release) - 22 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Chloride Activation, Hypertension
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. J. Yates, G. Masuyer, S. L. U. Schwager, A. Mohd, E. D. Sturrock, K. R. Acharya
Molecular And Thermodynamic Mechanisms Of The Chloride Dependent Human Angiotensin-I Converting Enzyme (Ace)
J. Biol. Chem. V. 289 1798 2014
[
close entry info
]
Hetero Components
(9, 13)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: BETA-D-MANNOSE (BMAa)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: ALPHA-L-FUCOSE (FUCa)
5a: MALONIC ACID (MLAa)
6a: N-ACETYL-D-GLUCOSAMINE (NAGa)
6b: N-ACETYL-D-GLUCOSAMINE (NAGb)
6c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7a: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)... (PE4a)
8a: SULFATE ION (SO4a)
9a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
BMA
1
Ligand/Ion
BETA-D-MANNOSE
3
CL
2
Ligand/Ion
CHLORIDE ION
4
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
5
MLA
1
Ligand/Ion
MALONIC ACID
6
NAG
3
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
7
PE4
1
Ligand/Ion
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
8
SO4
1
Ligand/Ion
SULFATE ION
9
ZN
1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:354 , HIS A:383 , GLU A:384 , HIS A:387 , GLU A:411 , TYR A:523 , ZN A:1629 , HOH A:2249 , HOH A:2251 , HOH A:2269
BINDING SITE FOR RESIDUE SO4 A1626
02
AC2
SOFTWARE
TYR A:224 , PRO A:519 , ILE A:521 , ARG A:522 , HOH A:2321
BINDING SITE FOR RESIDUE CL A1627
03
AC3
SOFTWARE
ARG A:186 , TRP A:485 , TRP A:486 , ARG A:489
BINDING SITE FOR RESIDUE CL A1628
04
AC4
SOFTWARE
HIS A:383 , HIS A:387 , GLU A:411 , SO4 A:1626
BINDING SITE FOR RESIDUE ZN A1629
05
AC5
SOFTWARE
ARG A:221 , THR A:465 , ARG A:468 , TRP A:469 , TYR A:520 , ILE A:521
BINDING SITE FOR RESIDUE MLA A1630
06
AC6
SOFTWARE
SER A:284 , TYR A:287 , LEU A:375 , GLU A:376 , SER A:422 , LEU A:427 , LYS A:449 , ACT A:1638 , HOH A:2212
BINDING SITE FOR RESIDUE PE4 A1631
07
AC7
SOFTWARE
GLN A:281 , HIS A:353 , LYS A:511 , HIS A:513 , TYR A:520 , HOH A:2209 , HOH A:2249 , HOH A:2381
BINDING SITE FOR RESIDUE ACT A1637
08
AC8
SOFTWARE
TYR A:287 , SER A:298 , GLU A:436 , HIS A:442 , ASN A:445 , PHE A:446 , PE4 A:1631 , HOH A:2221
BINDING SITE FOR RESIDUE ACT A1638
09
AC9
SOFTWARE
ASN A:72 , THR A:74 , GLU A:76 , ARG A:348
BINDING SITE FOR MONO-SACCHARIDE NAG A1632 BOUND TO ASN A 72
10
BC1
SOFTWARE
GLU A:43 , SER A:45 , GLU A:49 , LYS A:101 , ASN A:109 , ILE A:112
BINDING SITE FOR POLY-SACCHARIDE RESIDUES NAG A1633 THROUGH FUC A1636 BOUND TO ASN A 109
[
close Site info
]
SAPs(SNPs)/Variants
(6, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_034602 (M223T, chain A, )
2: VAR_023432 (T311M, chain A, )
3: VAR_014189 (I413T, chain A, )
4: VAR_014190 (F446V, chain A, )
5: VAR_023433 (T582M, chain A, )
6: VAR_023434 (P623L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_034602
M
828
T
ACE_HUMAN
Polymorphism
13306091
A
M
223
T
2
UniProt
VAR_023432
T
916
M
ACE_HUMAN
Polymorphism
3730043
A
T
311
M
3
UniProt
VAR_014189
I
1018
T
ACE_HUMAN
Polymorphism
4976
A
I
413
T
4
UniProt
VAR_014190
F
1051
V
ACE_HUMAN
Polymorphism
4977
A
F
446
V
5
UniProt
VAR_023433
T
1187
M
ACE_HUMAN
Polymorphism
12709442
A
T
582
M
6
UniProt
VAR_023434
P
1228
L
ACE_HUMAN
Unclassified
---
A
P
623
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (-|A:380-389)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
ACE_HUMAN
387-396
985-994
1
-
A:380-389
[
close PROSITE info
]
Exons
(12, 12)
Info
All Exons
Exon 1.14 (A:40-81)
Exon 1.15 (A:82-134)
Exon 1.16 (A:135-164)
Exon 1.17 (A:164-212)
Exon 1.18 (A:212-276)
Exon 1.19 (A:276-308)
Exon 1.20 (A:309-366)
Exon 1.21 (A:366-441)
Exon 1.22 (A:441-489)
Exon 1.23 (A:489-522)
Exon 1.24b (A:522-563)
Exon 1.25 (A:563-625)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.12/1.14
02: Boundary 1.14/1.15
03: Boundary 1.15/1.16
04: Boundary 1.16/1.17
05: Boundary 1.17/1.18
06: Boundary 1.18/1.19
07: Boundary 1.19/1.20
08: Boundary 1.20/1.21
09: Boundary 1.21/1.22
10: Boundary 1.22/1.23
11: Boundary 1.23/1.24b
12: Boundary 1.24b/1.25
13: Boundary 1.25/1.26b
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000290866
1a
ENSE00001837678
chr17:
61554432-61554704
273
ACE_HUMAN
1-83
83
0
-
-
1.2
ENST00000290866
2
ENSE00001730325
chr17:
61555292-61555459
168
ACE_HUMAN
84-139
56
0
-
-
1.3
ENST00000290866
3
ENSE00001701763
chr17:
61556368-61556461
94
ACE_HUMAN
140-171
32
0
-
-
1.4
ENST00000290866
4
ENSE00001645813
chr17:
61557130-61557273
144
ACE_HUMAN
171-219
49
0
-
-
1.5
ENST00000290866
5
ENSE00001792699
chr17:
61557698-61557889
192
ACE_HUMAN
219-283
65
0
-
-
1.6
ENST00000290866
6
ENSE00001692982
chr17:
61558452-61558549
98
ACE_HUMAN
283-315
33
0
-
-
1.7
ENST00000290866
7
ENSE00001711922
chr17:
61558927-61559099
173
ACE_HUMAN
316-373
58
0
-
-
1.8
ENST00000290866
8
ENSE00001761869
chr17:
61559827-61560050
224
ACE_HUMAN
373-448
76
0
-
-
1.9
ENST00000290866
9
ENSE00001684602
chr17:
61560390-61560534
145
ACE_HUMAN
448-496
49
0
-
-
1.10
ENST00000290866
10
ENSE00001799028
chr17:
61560821-61560919
99
ACE_HUMAN
496-529
34
0
-
-
1.11
ENST00000290866
11
ENSE00001715718
chr17:
61561210-61561332
123
ACE_HUMAN
529-570
42
0
-
-
1.12
ENST00000290866
12
ENSE00001741036
chr17:
61561691-61561902
212
ACE_HUMAN
570-641
72
0
-
-
1.14
ENST00000290866
14
ENSE00001680947
chr17:
61562597-61562733
137
ACE_HUMAN
641-686
46
1
A:40-81
42
1.15
ENST00000290866
15
ENSE00001763320
chr17:
61563918-61564076
159
ACE_HUMAN
687-739
53
1
A:82-134
53
1.16
ENST00000290866
16
ENSE00001046871
chr17:
61564347-61564434
88
ACE_HUMAN
740-769
30
1
A:135-164
30
1.17
ENST00000290866
17
ENSE00001046888
chr17:
61566009-61566152
144
ACE_HUMAN
769-817
49
1
A:164-212
49
1.18
ENST00000290866
18
ENSE00001046881
chr17:
61566302-61566493
192
ACE_HUMAN
817-881
65
1
A:212-276
65
1.19
ENST00000290866
19
ENSE00001046911
chr17:
61568315-61568412
98
ACE_HUMAN
881-913
33
1
A:276-308
33
1.20
ENST00000290866
20
ENSE00001180835
chr17:
61568570-61568742
173
ACE_HUMAN
914-971
58
1
A:309-366
58
1.21
ENST00000290866
21
ENSE00001180829
chr17:
61570797-61571020
224
ACE_HUMAN
971-1046
76
1
A:366-441
76
1.22
ENST00000290866
22
ENSE00001046826
chr17:
61571283-61571427
145
ACE_HUMAN
1046-1094
49
1
A:441-489
49
1.23
ENST00000290866
23
ENSE00001046886
chr17:
61571733-61571831
99
ACE_HUMAN
1094-1127
34
1
A:489-522
34
1.24b
ENST00000290866
24b
ENSE00001180817
chr17:
61573755-61573877
123
ACE_HUMAN
1127-1168
42
1
A:522-563
42
1.25
ENST00000290866
25
ENSE00001180815
chr17:
61574159-61574346
188
ACE_HUMAN
1168-1231
64
1
A:563-625
63
1.26b
ENST00000290866
26b
ENSE00001944704
chr17:
61574498-61574804
307
ACE_HUMAN
1231-1306
76
0
-
-
[
close EXON info
]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4c2oa_ (A:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Neurolysin-like
(55)
Protein domain
:
automated matches
(25)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d4c2oa_
A:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
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Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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Asym.Unit (203 KB)
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